RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ZNF367Q7RTV3 350 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 ZNF429Q86V71 674 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 PDPNQ86YL7 162 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.14□□□□□ -0.15
USB1-213ENST00000566292 RAB3CQ96E17 227 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 CNBD2Q96M20 576 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 MS4A10Q96PG2 267 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 CABLES2Q9BTV7 478 aa14.14□□□□□ -0.15
USB1-213ENST00000566292 TRAV1-2A0A0B4J238 106 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 M0R1X1 148 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 RAB27BO00194 218 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 MFNGO00587 321 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 ARPC1BO15143 372 aaKnown RBP14.13□□□□□ -0.15
USB1-213ENST00000566292 SLC25A17O43808 307 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 LY86O95711 162 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 APOA2P02652 100 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 GSTT2P0CG29 244 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 GSTT2BP0CG30 244 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 RANBP1P43487 201 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 SERPINB10P48595 397 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 SSBP2P81877 361 aaPredicted RBP14.13□□□□□ -0.15
USB1-213ENST00000566292 PYHIN1Q6K0P9 492 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 OR10R2Q8NGX6 335 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 ARPC1AQ92747 370 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 C5orf30Q96GV9 206 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 ASCL2Q99929 193 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 OR2D2Q9H210 308 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 VCX3BQ9H321 246 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 SLC35D1Q9NTN3 355 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 NDUFB11Q9NX14 153 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 U3KQK5 164 aa14.13□□□□□ -0.15
USB1-213ENST00000566292 A0A0B4J203 849 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 IFITM5A6NNB3 132 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 PDCD5O14737 125 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 BET1O15155 118 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 SAP30O75446 220 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 IGLV2-23P01705 113 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 OR8U9P0C7N5 309 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 GNB3P16520 340 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 TPPP2P59282 170 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 MAFIPQ8WZ33 124 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 FLYWCH2Q96CP2 140 aaKnown RBP14.12□□□□□ -0.15
USB1-213ENST00000566292 RHOVQ96L33 236 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 SDHAF2Q9NX18 166 aa14.12□□□□□ -0.15
USB1-213ENST00000566292 ZNF230Q9UIE0 474 aaPredicted RBP14.12□□□□□ -0.15
USB1-213ENST00000566292 HUWE1Q7Z6Z7 4374 aaKnown RBP14.12□□□□□ -0.15
USB1-213ENST00000566292 TRBV6-7A0A0A0MS04 114 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 CRYGBP07316 175 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 HIST1H1DP16402 221 aaKnown RBP14.11□□□□□ -0.15
USB1-213ENST00000566292 HSPA13P48723 471 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 MRPS15P82914 257 aaKnown RBP14.11□□□□□ -0.15
USB1-213ENST00000566292 PJVKQ0ZLH3 352 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 FXYD3Q14802 87 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 ACSM6Q6P461 480 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 NR2C2APQ86WQ0 139 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 GRPEL2Q8TAA5 225 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 BLOC1S6Q9UL45 172 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 TNCP24821 2201 aa14.11□□□□□ -0.15
USB1-213ENST00000566292 A0A075B6Q4 140 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 TRDV1A0A1B0GX56 115 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 DIRAS3O95661 229 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 HSPB1P04792 205 aaKnown RBP14.1□□□□□ -0.15
USB1-213ENST00000566292 RAB3BP20337 219 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 RAB6AP20340 208 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 MYL9P24844 172 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 OR10J5Q8NHC4 309 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 SLA2Q9H6Q3 261 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 SMAD5-AS1Q9Y6J3 95 aa14.1□□□□□ -0.15
USB1-213ENST00000566292 TRGV3P03979 118 aa14.09□□□□□ -0.15
USB1-213ENST00000566292 SPNP16150 400 aa14.09□□□□□ -0.15
USB1-213ENST00000566292 GADD45AP24522 165 aa14.09□□□□□ -0.15
USB1-213ENST00000566292 C22orf42Q6IC83 251 aa14.09□□□□□ -0.15
USB1-213ENST00000566292 ELF5Q9UKW6 265 aaPredicted RBP14.09□□□□□ -0.15
USB1-213ENST00000566292 IGKV1D-8A0A087WSZ0 117 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 SRRM4A7MD48 611 aaKnown RBP14.08□□□□□ -0.16
USB1-213ENST00000566292 CD40LGP29965 261 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 LGALS7P47929 136 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 MRGPRG-AS1Q2M3A8 158 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 TMEM177Q53S58 311 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 POC5Q8NA72 575 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 BVESQ8NE79 360 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 OR5T1Q8NG75 326 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 HARBI1Q96MB7 349 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 ZNF355PQ9NSJ1 428 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 RAB26Q9ULW5 256 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 DNAH7Q8WXX0 4024 aa14.08□□□□□ -0.16
USB1-213ENST00000566292 RYR3Q15413 4870 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 SMIM30A4D0T7 59 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 CNIH1O95406 144 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 GP9P14770 177 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 GALP22466 123 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 GABARAPL2P60520 117 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 PITPNAQ00169 270 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 SRSF7Q16629 238 aaKnown RBP eCLIP14.07□□□□□ -0.16
USB1-213ENST00000566292 Q6ZS49 121 aa14.07□□□□□ -0.16
USB1-213ENST00000566292 H1FOOQ8IZA3 346 aaPredicted RBP14.07□□□□□ -0.16
USB1-213ENST00000566292 METTL21EPA6NDL7 271 aa14.06□□□□□ -0.16
USB1-213ENST00000566292 H3BUA1 57 aa14.06□□□□□ -0.16
USB1-213ENST00000566292 SHOXO15266 292 aa14.06□□□□□ -0.16
USB1-213ENST00000566292 ARFRP1Q13795 201 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms