RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 TUBA4BQ9H853 241 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 OR5V1Q9UGF6 321 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 CFAP45Q9UL16 551 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 C14orf166Q9Y224 244 aaKnown RBP1.37□□□□□ -2.19
PALB2-203ENST00000565038 CCL26Q9Y258 94 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 FADS3Q9Y5Q0 445 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 DMXL1Q9Y485 3027 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 AKAP13Q12802 2813 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 A0A0G2JMZ2 1700 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 ZZEF1O43149 2961 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 DOCK6Q96HP0 2047 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 FRYQ5TBA9 3013 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 ACACBO00763 2458 aa1.37□□□□□ -2.19
PALB2-203ENST00000565038 LAMB1P07942 1786 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 MYH7BA7E2Y1 1941 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 PTPRSQ13332 1948 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 F5P12259 2224 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CNOT1A5YKK6 2376 aaKnown RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 FOCADQ5VW36 1801 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 TRAV8-3A0A0A6YYJ7 113 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 A0A1W2PRG6 482 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 PGPA6NDG6 321 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 TRPC5OSA6NMA1 111 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CD300LBA8K4G0 201 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 HSBP1L1C9JCN9 74 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 F8VP50 259 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 K7EQS6 105 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 PIRO00625 290 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 SGCEO43556 437 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 NEMFO60524 1076 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 HLA-AP01891 365 aaKnown RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 CXCL8P10145 99 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 KCNE1P15382 129 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 ZNF3P17036 446 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 UGT2B10P36537 528 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 COILP38432 576 aaPredicted RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 GCLMP48507 274 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 ZNF83P51522 516 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 OR2B6P58173 313 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 PRDX1Q06830 199 aaKnown RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 FOXF1Q12946 379 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 RAB31Q13636 194 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CST6Q15828 149 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 USF2Q15853 346 aaPredicted RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 PSG3Q16557 428 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CEACAM21Q3KPI0 293 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 Q499Y3 187 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 OR10J3Q5JRS4 329 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 Q6ZT83 130 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 ZNF720Q7Z2F6 126 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 NAV1Q8NEY1 1877 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 ATP6V1C2Q8NEY4 427 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CASTOR1Q8WTX7 329 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CCDC12Q8WUD4 166 aaPredicted RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 CCL17Q92583 94 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 GTF2H4Q92759 462 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 MAL2Q969L2 176 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CLDN23Q96B33 292 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 CCDC127Q96BQ5 260 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 TSGA10Q9BZW7 698 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 LRRC19Q9H756 370 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 SNX24Q9Y343 169 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 ANKRD11Q6UB99 2663 aaPredicted RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 BPTFQ12830 3046 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 DSPP15924 2871 aaKnown RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 CLUHO75153 1309 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 PTPRJQ12913 1337 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 SPENQ96T58 3664 aaKnown RBP1.36□□□□□ -2.19
PALB2-203ENST00000565038 PARP14Q460N5 1801 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 ZNF236Q9UL36 1845 aa1.36□□□□□ -2.19
PALB2-203ENST00000565038 KNL1Q8NG31 2342 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 FREM2Q5SZK8 3169 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 CACNA1AO00555 2505 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 DOCK5Q9H7D0 1870 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MYH4Q9Y623 1939 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MAST2Q6P0Q8 1798 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 FLNBO75369 2602 aaKnown RBP1.35□□□□□ -2.19
PALB2-203ENST00000565038 TRAV8-2A0A0B4J237 113 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 SPAARA0A1B0GVQ0 90 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 A0A1B0GXF2 115 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 SMLR1H3BR10 107 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 M0QX08 132 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 GYG2O15488 501 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 FABP7O15540 132 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 KLRC4O43908 158 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 SLC2A1P11166 492 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 TSPOP30536 169 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MYL6P60660 151 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 TFAMQ00059 246 aaKnown RBP1.35□□□□□ -2.19
PALB2-203ENST00000565038 GTF2BQ00403 316 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 CD164Q04900 197 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 CLEC12AQ5QGZ9 265 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 ELP2Q6IA86 826 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 SPOPLQ6IQ16 392 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 NOXRED1Q6NXP6 359 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 DGAT2L6Q6ZPD8 337 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 TPGS1Q6ZTW0 290 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 TCF23Q7RTU1 214 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 OLIG3Q7RTU3 272 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MARCH3Q86UD3 253 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms