RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ZNF702PQ9H963 129 aa13.3□□□□□ -0.28
RNF40-206ENST00000564260 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
RNF40-206ENST00000564260 PRELID3BQ9Y3B1 194 aa13.3□□□□□ -0.28
RNF40-206ENST00000564260 IGHV3-72A0A0B4J1Y9 119 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 KCNAB3O43448 404 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 NDUFA3O95167 84 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 CD74P04233 296 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 AMY1AP04745 511 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 AMY2AP04746 511 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
RNF40-206ENST00000564260 AADACP22760 399 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 HLA-DMAP28067 261 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 DUTP33316 252 aaKnown RBP13.29□□□□□ -0.28
RNF40-206ENST00000564260 LGALS7P47929 136 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 UCP3P55916 312 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 PROK1P58294 105 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 TSPAN5P62079 268 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 MEF2DQ14814 521 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
RNF40-206ENST00000564260 FAM131AQ6UXB0 335 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 CCDC190Q86UF4 302 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 C3orf56Q8N813 242 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 ZNF383Q8NA42 475 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 TSNAXQ99598 290 aaKnown RBP13.29□□□□□ -0.28
RNF40-206ENST00000564260 RASL11BQ9BPW5 248 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 KIAA1456Q9P272 454 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 KLK11Q9UBX7 282 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 STAB1Q9NY15 2570 aa13.29□□□□□ -0.28
RNF40-206ENST00000564260 IGKV1D-13A0A0B4J2D9 117 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 A6NHS1 94 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 NCBP2LA6PVI3 153 aaKnown RBP13.28□□□□□ -0.28
RNF40-206ENST00000564260 H7C2Y5 167 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 NBR2O15453 112 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 IGLV2-14P01704 120 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 PMP2P02689 132 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 IFNA6P05013 189 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 IGKV1-13P0DP09 117 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 ECI1P42126 302 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 KIR2DS2P43631 304 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 RFX2P48378 723 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 BLCAPP62952 87 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 MMDQ15546 238 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 FOXB2Q5VYV0 432 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 SHISA2Q6UWI4 295 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 TCTEX1D1Q8N7M0 179 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 Q8N9W7 124 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 BVESQ8NE79 360 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 DDB2Q92466 427 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 FLYWCH2Q96CP2 140 aaKnown RBP13.28□□□□□ -0.28
RNF40-206ENST00000564260 ZNF2Q9BSG1 426 aaPredicted RBP13.28□□□□□ -0.28
RNF40-206ENST00000564260 SLC35D1Q9NTN3 355 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 ANK2Q01484 3957 aa13.28□□□□□ -0.28
RNF40-206ENST00000564260 IGHG2P01859 326 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 S100GP29377 79 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 VDAC2P45880 294 aaPredicted RBP13.27□□□□□ -0.29
RNF40-206ENST00000564260 AP3S2P59780 193 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 DGCR2P98153 550 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 CATR1Q13166 79 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 EIF4EBP1Q13541 118 aaPredicted RBP13.27□□□□□ -0.29
RNF40-206ENST00000564260 HNF4GQ14541 408 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 ABCA11PQ4W5N1 156 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 TMEM177Q53S58 311 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 CMTM1Q8IZ96 169 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 OR6Q1Q8NGQ2 317 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 OSR1Q8TAX0 266 aaPredicted RBP13.27□□□□□ -0.29
RNF40-206ENST00000564260 CD300LFQ8TDQ1 290 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 SECTM1Q8WVN6 248 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 GON7Q9BXV9 100 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 SLC5A7Q9GZV3 580 aa13.27□□□□□ -0.29
RNF40-206ENST00000564260 RBFOX2O43251 390 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF40-206ENST00000564260 HLA-DRB1P01911 266 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 C5orf64Q2M2E5 130 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 ARSJQ5FYB0 599 aaPredicted RBP13.26□□□□□ -0.29
RNF40-206ENST00000564260 STEAP1BQ6NZ63 245 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 KCTD9Q7L273 389 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 FOXRED2Q8IWF2 684 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 ZNF486Q96H40 463 aaPredicted RBP13.26□□□□□ -0.29
RNF40-206ENST00000564260 WNT10AQ9GZT5 417 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 FAM212BQ9NTI7 297 aaPredicted RBP13.26□□□□□ -0.29
RNF40-206ENST00000564260 SERTAD4Q9NUC0 356 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 V9GYH0 126 aa13.26□□□□□ -0.29
RNF40-206ENST00000564260 PEX14O75381 377 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 CD3DP04234 171 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 AKAIN1P0CW23 69 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 FBLN7Q53RD9 439 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 LHFPL1Q86WI0 220 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 SLC38A6Q8IZM9 456 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 DRAXINQ8NBI3 349 aaPredicted RBP13.25□□□□□ -0.29
RNF40-206ENST00000564260 OR4S2Q8NH73 311 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 C5orf30Q96GV9 206 aa13.25□□□□□ -0.29
RNF40-206ENST00000564260 ANKRD20A5PA0PJZ0 165 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 AP4M1O00189 453 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 GPR31O00270 319 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 RRHO14718 337 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 CREBL2O60519 120 aaPredicted RBP13.24□□□□□ -0.29
RNF40-206ENST00000564260 RAB3DO95716 219 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 IGKV1-16P04430 117 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms