RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TFAP2AP05549 437 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 FCGR3AP08637 254 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 RAB3BP20337 219 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 RAB6AP20340 208 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 GALP22466 123 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 CHRNA7P36544 502 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 SERPINB10P48595 397 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 GABARAPL2P60520 117 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 RPS16P62249 146 aaKnown RBP7.98□□□□□ -1.13
CLK3-205ENST00000561673 ZNF616Q08AN1 781 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 ZNF260Q3ZCT1 412 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 VAX1Q5SQQ9 334 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 ASPHD1Q5U4P2 390 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 UBE2UQ5VVX9 321 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 C22orf42Q6IC83 251 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 ZNF562Q6V9R5 426 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 PPP1R27Q86WC6 154 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 OR10J5Q8NHC4 309 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 MAFIPQ8WZ33 124 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 TSNAXQ99598 290 aaKnown RBP7.98□□□□□ -1.13
CLK3-205ENST00000561673 B9D2Q9BPU9 175 aa7.98□□□□□ -1.13
CLK3-205ENST00000561673 FAM103A1Q9BTL3 118 aaKnown RBP7.98□□□□□ -1.13
CLK3-205ENST00000561673 ALX4Q9H161 411 aaPredicted RBP7.98□□□□□ -1.13
CLK3-205ENST00000561673 FOXA2Q9Y261 457 aaPredicted RBP7.98□□□□□ -1.13
CLK3-205ENST00000561673 HUWE1Q7Z6Z7 4374 aaKnown RBP7.98□□□□□ -1.13
CLK3-205ENST00000561673 TRBV6-7A0A0A0MS04 114 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 SMIM30A4D0T7 59 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 M0R1X1 148 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 MFNGO00587 321 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 MRPS14O60783 128 aaKnown RBP7.97□□□□□ -1.13
CLK3-205ENST00000561673 OR8U8P0C7N1 319 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 OR8U9P0C7N5 309 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 HIST1H1DP16402 221 aaKnown RBP7.97□□□□□ -1.13
CLK3-205ENST00000561673 GADD45AP24522 165 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 ECI1P42126 302 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 CD69Q07108 199 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 TMEM267Q0VDI3 215 aaPredicted RBP7.97□□□□□ -1.13
CLK3-205ENST00000561673 AKIRIN2Q53H80 203 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 ACTBL2Q562R1 376 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 C11orf87Q6NUJ2 197 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 PDPNQ86YL7 162 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 SPARTQ8N0X7 666 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 TCTEX1D1Q8N7M0 179 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.97□□□□□ -1.13
CLK3-205ENST00000561673 ABHD5Q8WTS1 349 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 FLYWCH2Q96CP2 140 aaKnown RBP7.97□□□□□ -1.13
CLK3-205ENST00000561673 PRR25Q96S07 402 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 CABLES2Q9BTV7 478 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 SDHAF2Q9NX18 166 aa7.97□□□□□ -1.13
CLK3-205ENST00000561673 ELF5Q9UKW6 265 aaPredicted RBP7.97□□□□□ -1.13
CLK3-205ENST00000561673 METTL21EPA6NDL7 271 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 EREGO14944 169 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 ARPC1BO15143 372 aaKnown RBP7.96□□□□□ -1.14
CLK3-205ENST00000561673 SLC25A17O43808 307 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 SPDEFO95238 335 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 DIRAS3O95661 229 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 CA2P00918 260 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 IGLV2-23P01705 113 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 APOA2P02652 100 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 PSMB9P28065 219 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 FGF9P31371 208 aaPredicted RBP7.96□□□□□ -1.14
CLK3-205ENST00000561673 SRSF7Q16629 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
CLK3-205ENST00000561673 UNQ5815/PRO19632Q6UWF5 114 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 LFNGQ8NES3 379 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 DCUN1D4Q92564 292 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 C5orf30Q96GV9 206 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 MS4A10Q96PG2 267 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 ATG5Q9H1Y0 275 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 OR2D2Q9H210 308 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 SLC35D1Q9NTN3 355 aa7.96□□□□□ -1.14
CLK3-205ENST00000561673 TXNL4BQ9NX01 149 aaKnown RBP7.96□□□□□ -1.14
CLK3-205ENST00000561673 LSM4Q9Y4Z0 139 aaKnown RBP7.96□□□□□ -1.14
CLK3-205ENST00000561673 IGKV1D-8A0A087WSZ0 117 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 SRRM4A7MD48 611 aaKnown RBP7.95□□□□□ -1.14
CLK3-205ENST00000561673 NOTOA8MTQ0 251 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 LINC01619G3V211 115 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 CRYGBP07316 175 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
CLK3-205ENST00000561673 TALDO1P37837 337 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 LGALS7P47929 136 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 INSL3P51460 131 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 SLURP1P55000 103 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 SSBP2P81877 361 aaPredicted RBP7.95□□□□□ -1.14
CLK3-205ENST00000561673 PJVKQ0ZLH3 352 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 DCTN2Q13561 401 aaKnown RBP7.95□□□□□ -1.14
CLK3-205ENST00000561673 ARFRP1Q13795 201 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 FXYD3Q14802 87 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 CDNFQ49AH0 187 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 PYHIN1Q6K0P9 492 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 Q6ZS49 121 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 GRPEL2Q8TAA5 225 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 ARPC1AQ92747 370 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 DLX4Q92988 240 aaPredicted RBP7.95□□□□□ -1.14
CLK3-205ENST00000561673 GINS4Q9BRT9 223 aa7.95□□□□□ -1.14
CLK3-205ENST00000561673 YTHDF1Q9BYJ9 559 aaKnown RBP7.95□□□□□ -1.14
CLK3-205ENST00000561673 TENM3Q9P273 2699 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 A0A087WW49 117 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 OVOL1O14753 267 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms