RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 P2RX4Q99571 388 aa12.11□□□□□ -0.47
CCDC113-203ENST00000561517 GINS4Q9BRT9 223 aa12.11□□□□□ -0.47
CCDC113-203ENST00000561517 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
CCDC113-203ENST00000561517 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
CCDC113-203ENST00000561517 G3V318 75 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 FCN1O00602 326 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 SPDEFO95238 335 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 RPS16P62249 146 aaKnown RBP12.1□□□□□ -0.47
CCDC113-203ENST00000561517 CX3CL1P78423 397 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 NDPQ00604 133 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 PSG5Q15238 335 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 C19orf54Q5BKX5 351 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 CROCCP3Q8IVE0 287 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 MINDY2Q8NBR6 621 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 TSNAXQ99598 290 aaKnown RBP12.1□□□□□ -0.47
CCDC113-203ENST00000561517 PARP11Q9NR21 331 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
CCDC113-203ENST00000561517 TRAV41A0A0B4J266 112 aa12.09□□□□□ -0.47
CCDC113-203ENST00000561517 DUS4LO95620 317 aaKnown RBP12.09□□□□□ -0.47
CCDC113-203ENST00000561517 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
CCDC113-203ENST00000561517 RPS19P39019 145 aaKnown RBP12.09□□□□□ -0.47
CCDC113-203ENST00000561517 TAGLNQ01995 201 aaKnown RBP12.09□□□□□ -0.47
CCDC113-203ENST00000561517 PLGLAQ15195 96 aa12.09□□□□□ -0.47
CCDC113-203ENST00000561517 FLYWCH2Q96CP2 140 aaKnown RBP12.09□□□□□ -0.47
CCDC113-203ENST00000561517 RAX2Q96IS3 184 aa12.09□□□□□ -0.47
CCDC113-203ENST00000561517 METTL1Q9UBP6 276 aaKnown RBP12.09□□□□□ -0.47
CCDC113-203ENST00000561517 FBXO7Q9Y3I1 522 aa12.09□□□□□ -0.47
CCDC113-203ENST00000561517 RBM7Q9Y580 266 aaKnown RBP12.09□□□□□ -0.47
CCDC113-203ENST00000561517 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
CCDC113-203ENST00000561517 DNAH3Q8TD57 4116 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 TRAV18A0A075B6X5 111 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 EGR2P11161 476 aaPredicted RBP12.08□□□□□ -0.48
CCDC113-203ENST00000561517 LGALS7P47929 136 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
CCDC113-203ENST00000561517 FOXB2Q5VYV0 432 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 ZNF562Q6V9R5 426 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 REC114Q7Z4M0 266 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 C4orf3Q8WVX3 66 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 DDB2Q92466 427 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 DIABLOQ9NR28 239 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
CCDC113-203ENST00000561517 CCL24O00175 119 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 PRB2P02812 416 aaPredicted RBP12.07□□□□□ -0.48
CCDC113-203ENST00000561517 DUTP33316 252 aaKnown RBP12.07□□□□□ -0.48
CCDC113-203ENST00000561517 LSM3P62310 102 aaKnown RBP12.07□□□□□ -0.48
CCDC113-203ENST00000561517 TMEM177Q53S58 311 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 TCTEX1D1Q8N7M0 179 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 FUNDC2Q9BWH2 189 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 KLK15Q9H2R5 256 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 AUNIPQ9H7T9 357 aa12.07□□□□□ -0.48
CCDC113-203ENST00000561517 SLC25A17O43808 307 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 SOX15O60248 233 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 TUSC2O75896 110 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 CRYGBP07316 175 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 RRASP10301 218 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 NFYAP23511 347 aaPredicted RBP12.06□□□□□ -0.48
CCDC113-203ENST00000561517 LUMP51884 338 aaPredicted RBP12.06□□□□□ -0.48
CCDC113-203ENST00000561517 TMEM267Q0VDI3 215 aaPredicted RBP12.06□□□□□ -0.48
CCDC113-203ENST00000561517 RTL8BQ17RB0 113 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 ECSCRQ19T08 205 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 ZNF645Q8N7E2 425 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 BVESQ8NE79 360 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 BEST4Q8NFU0 473 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 OR13F1Q8NGS4 319 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 DUX3Q96PT4 197 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 CLCC1Q96S66 551 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 SORL1Q92673 2214 aa12.06□□□□□ -0.48
CCDC113-203ENST00000561517 LINC00473A8K010 186 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 XRCC3O43542 346 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 SLC22A5O76082 557 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 CA2P00918 260 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 RAB9AP51151 201 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 RUNX1Q01196 453 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 CBX3Q13185 183 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 DEFB136Q30KP8 78 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 AKIRIN2Q53H80 203 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 UBE2NLQ5JXB2 153 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 GVQW1Q8N7I0 195 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 SLC25A46Q96AG3 418 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 MCRIP2Q9BUT9 160 aaKnown RBP12.05□□□□□ -0.48
CCDC113-203ENST00000561517 GPR61Q9BZJ8 451 aa12.05□□□□□ -0.48
CCDC113-203ENST00000561517 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
CCDC113-203ENST00000561517 FOXA2Q9Y261 457 aaPredicted RBP12.05□□□□□ -0.48
CCDC113-203ENST00000561517 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
CCDC113-203ENST00000561517 A0A1W2PN81 502 aa12.04□□□□□ -0.48
CCDC113-203ENST00000561517 SRRM4A7MD48 611 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms