RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 LINC01619G3V211 115 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 PDCD5O14737 125 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 ARPC1BO15143 372 aaKnown RBP7.9□□□□□ -1.14
LDLR-214ENST00000560628 SLC25A17O43808 307 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 APOA2P02652 100 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 FCGR3AP08637 254 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 LGALS1P09382 135 aaKnown RBP7.9□□□□□ -1.14
LDLR-214ENST00000560628 NHLRC4P0CG21 123 aaPredicted RBP7.9□□□□□ -1.14
LDLR-214ENST00000560628 TPPP2P59282 170 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 PJVKQ0ZLH3 352 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 FXYD3Q14802 87 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 AKIRIN2Q53H80 203 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 CD200R1LQ6Q8B3 271 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 ZNF367Q7RTV3 350 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 OR5T1Q8NG75 326 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 OR4A4PQ8NGN8 299 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 OR10R2Q8NGX6 335 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 GRPEL2Q8TAA5 225 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 FLYWCH2Q96CP2 140 aaKnown RBP7.9□□□□□ -1.14
LDLR-214ENST00000560628 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 ZNF355PQ9NSJ1 428 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 SLC35D1Q9NTN3 355 aa7.9□□□□□ -1.14
LDLR-214ENST00000560628 ERICH4A6NGS2 130 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 IFITM5A6NNB3 132 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 RAB27BO00194 218 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 SAP30O75446 220 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 CNIH1O95406 144 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 TRGV3P03979 118 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 HSPB1P04792 205 aaKnown RBP7.89□□□□□ -1.15
LDLR-214ENST00000560628 MYL9P24844 172 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 CD40LGP29965 261 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 RANBP1P43487 201 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 SERPINB10P48595 397 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 INSL3P51460 131 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 TBCEQ15813 527 aaPredicted RBP7.89□□□□□ -1.15
LDLR-214ENST00000560628 C22orf42Q6IC83 251 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 ZNF429Q86V71 674 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 PDPNQ86YL7 162 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 TCTEX1D1Q8N7M0 179 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 BVESQ8NE79 360 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 OR10J5Q8NHC4 309 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 ARPC1AQ92747 370 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 RHOVQ96L33 236 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 OR2D2Q9H210 308 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 SDHAF2Q9NX18 166 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 ELF5Q9UKW6 265 aaPredicted RBP7.89□□□□□ -1.15
LDLR-214ENST00000560628 RBM7Q9Y580 266 aaKnown RBP7.89□□□□□ -1.15
LDLR-214ENST00000560628 U3KQK5 164 aa7.89□□□□□ -1.15
LDLR-214ENST00000560628 TRBV6-7A0A0A0MS04 114 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 TRDV1A0A1B0GX56 115 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 J3QRK9 145 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 MFNGO00587 321 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 SPDEFO95238 335 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 IGLV2-23P01705 113 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 SPNP16150 400 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 HIST1H1DP16402 221 aaKnown RBP7.88□□□□□ -1.15
LDLR-214ENST00000560628 RAB3BP20337 219 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 GADD45AP24522 165 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 TALDO1P37837 337 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 HSPA13P48723 471 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 ARFRP1Q13795 201 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 PYHIN1Q6K0P9 492 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 NR2C2APQ86WQ0 139 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.88□□□□□ -1.15
LDLR-214ENST00000560628 C5orf30Q96GV9 206 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 GINS4Q9BRT9 223 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 ATG5Q9H1Y0 275 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 NDUFB11Q9NX14 153 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 BLOC1S6Q9UL45 172 aa7.88□□□□□ -1.15
LDLR-214ENST00000560628 IGKV1D-8A0A087WSZ0 117 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 ANKRD34BA5PLL1 514 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 METTL21EPA6NDL7 271 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 SRRM4A7MD48 611 aaKnown RBP7.87□□□□□ -1.15
LDLR-214ENST00000560628 SHOXO15266 292 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 CRYGBP07316 175 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 APELAP0DMC3 54 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 RAB6AP20340 208 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 LGALS7P47929 136 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 SSBP2P81877 361 aaPredicted RBP7.87□□□□□ -1.15
LDLR-214ENST00000560628 CDNFQ49AH0 187 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 ACSM6Q6P461 480 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 OVCH2Q7RTZ1 564 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 HAPLN4Q86UW8 402 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 HARBI1Q96MB7 349 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 OR4C12Q96R67 309 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 CABLES2Q9BTV7 478 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 ST6GALNAC5Q9BVH7 336 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 RAB26Q9ULW5 256 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 SMAD5-AS1Q9Y6J3 95 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 SORL1Q92673 2214 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 DNAH9Q9NYC9 4486 aa7.87□□□□□ -1.15
LDLR-214ENST00000560628 C13orf42A0A1B0GVH6 325 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 PSMB9P28065 219 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 PITPNAQ00169 270 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 DEFA5Q01523 94 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 CBX3Q13185 183 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 SBSPONQ8IVN8 264 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 H1FOOQ8IZA3 346 aaPredicted RBP7.86□□□□□ -1.15
LDLR-214ENST00000560628 POC5Q8NA72 575 aa7.86□□□□□ -1.15
LDLR-214ENST00000560628 SLA2Q9H6Q3 261 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms