RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 WASHC3Q9Y3C0 194 aa17.32■□□□□ 0.36
SNX1-206ENST00000559389 AMY2AP04746 511 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 ZNF735P0CB33 412 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 MC5RP33032 325 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 RELBQ01201 579 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 KLF9Q13886 244 aaPredicted RBP17.31■□□□□ 0.36
SNX1-206ENST00000559389 KRTAP21-3Q3LHN1 58 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 AADACL3Q5VUY0 350 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 ZBTB34Q8NCN2 500 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 TMEM158Q8WZ71 300 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 DDB2Q92466 427 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 ADTRPQ96IZ2 230 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 AKR1E2Q96JD6 320 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 C19orf24Q9BVV8 132 aa17.31■□□□□ 0.36
SNX1-206ENST00000559389 ZFHX3Q15911 3703 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 LINC00473A8K010 186 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 APOA2P02652 100 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 CRYBA1P05813 215 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 HKR1P10072 659 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 AP3S2P59780 193 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 HNF4GQ14541 408 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 ZNF818PQ6ZRF7 136 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 KCTD9Q7L273 389 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 PDPNQ86YL7 162 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 BORCS5Q969J3 196 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 HSD17B10Q99714 261 aaKnown RBP17.3■□□□□ 0.36
SNX1-206ENST00000559389 NPFFR1Q9GZQ6 430 aa17.3■□□□□ 0.36
SNX1-206ENST00000559389 RANBP3Q9H6Z4 567 aaPredicted RBP17.3■□□□□ 0.36
SNX1-206ENST00000559389 NDUFA7O95182 113 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 GNRHRP30968 328 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 UCP3P55916 312 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 BAK1Q16611 211 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 ZNF66Q6ZN08 573 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 S100ZQ8WXG8 99 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 TAF15Q92804 592 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNX1-206ENST00000559389 SLC35D1Q9NTN3 355 aa17.29■□□□□ 0.36
SNX1-206ENST00000559389 DISC1C4P0D8 188 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 H7C2Y5 167 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 M0QZK8 103 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 RPL30P62888 115 aaKnown RBP17.28■□□□□ 0.36
SNX1-206ENST00000559389 TAGLNQ01995 201 aaKnown RBP17.28■□□□□ 0.36
SNX1-206ENST00000559389 TRIQKQ629K1 86 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 Q6ZSV7 163 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 TOMM5Q8N4H5 51 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 C5orf56Q8N8D9 126 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 BVESQ8NE79 360 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 OR8H1Q8NGG4 311 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 OR4C13Q8NGP0 309 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 DEDD2Q8WXF8 326 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 SLC2A8Q9NY64 477 aa17.28■□□□□ 0.36
SNX1-206ENST00000559389 RNF212BA8MTL3 300 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 FGF16O43320 207 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 IGKV1-16P04430 117 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 AMY1AP04745 511 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 PPP5CP53041 499 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 RAG2P55895 527 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 SCGB2B2Q4G0G5 96 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 MRGPRFQ96AM1 343 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 GPHA2Q96T91 129 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 RSRP1Q9BUV0 290 aa17.27■□□□□ 0.36
SNX1-206ENST00000559389 GPR31O00270 319 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 TNFSF12O43508 249 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 TSPAN9O75954 239 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 RRASP10301 218 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 IL7P13232 177 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 FAUP35544 74 aaKnown RBP17.26■□□□□ 0.35
SNX1-206ENST00000559389 MMDQ15546 238 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 RTL8BQ17RB0 113 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 LPCAT3Q6P1A2 487 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 C11orf88Q6PI97 169 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 SLC38A6Q8IZM9 456 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 TERB2Q8NHR7 220 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 TCTEX1D2Q8WW35 142 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 RITA1Q96K30 269 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 PRRT1Q99946 306 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 ZNF702PQ9H963 129 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 HRASLSQ9HDD0 168 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 PLSCR3Q9NRY6 295 aa17.26■□□□□ 0.35
SNX1-206ENST00000559389 TMEM89A2RUT3 159 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 Q8N2B8 174 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 FAM71E2Q8N5Q1 922 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 Q8N9W7 124 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 OR51S1Q8NGJ8 323 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 OR4F5Q8NH21 305 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 RNF5Q99942 180 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 CCDC32Q9BV29 185 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 WDR12Q9GZL7 423 aaKnown RBP17.25■□□□□ 0.35
SNX1-206ENST00000559389 PRELID3BQ9Y3B1 194 aa17.25■□□□□ 0.35
SNX1-206ENST00000559389 NBR2O15453 112 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 NDUFA3O95167 84 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 PGAM2P15259 253 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 CNTFRP26992 372 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 F2RL1P55085 397 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 BLCAPP62952 87 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 CATR1Q13166 79 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 CBX3Q13185 183 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 OR2B11Q5JQS5 317 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 ZNF57Q68EA5 555 aaPredicted RBP17.24■□□□□ 0.35
SNX1-206ENST00000559389 CMTM1Q8IZ96 169 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 NPBQ8NG41 125 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms