RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 FXYD3Q14802 87 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 SRSF7Q16629 238 aaKnown RBP eCLIP15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 AKIRIN2Q53H80 203 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 ACSM6Q6P461 480 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 CD200R1LQ6Q8B3 271 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 PTX4Q96A99 478 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 MGLLQ99685 303 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 ZNF230Q9UIE0 474 aaPredicted RBP15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 V9GY05 133 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 RYR3Q15413 4870 aa15.78■□□□□ 0.12
TSPAN3-206ENST00000559373 A0A0B4J203 849 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 ANKRD34BA5PLL1 514 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 ARL6IP5O75915 188 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 HSPB1P04792 205 aaKnown RBP15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 OR8U9P0C7N5 309 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 GSTT2P0CG29 244 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 GSTT2BP0CG30 244 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 MLLT11Q13015 90 aaPredicted RBP15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 ZNF562Q6V9R5 426 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 TCTEX1D1Q8N7M0 179 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 C5orf30Q96GV9 206 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 TSNAXQ99598 290 aaKnown RBP15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 OR2D2Q9H210 308 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 SLC35D1Q9NTN3 355 aa15.77■□□□□ 0.12
TSPAN3-206ENST00000559373 SHISA3A0PJX4 238 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 LDLRAD4O15165 306 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 CNIH1O95406 144 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 APOA2P02652 100 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 FRMD6-AS1P0C7T7 363 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 GNB3P16520 340 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 SSBP2P81877 361 aaPredicted RBP15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 PITPNAQ00169 270 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 OR56B1Q8NGI3 324 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 FLYWCH2Q96CP2 140 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 RHOVQ96L33 236 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 RNF5Q99942 180 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 RSRP1Q9BUV0 290 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 GHITMQ9H3K2 345 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 MGAT4AQ9UM21 535 aa15.76■□□□□ 0.11
TSPAN3-206ENST00000559373 SMIM30A4D0T7 59 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 IGLV2-23P01705 113 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 CRHBPP24387 322 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 TRAM1Q15629 374 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 PYHIN1Q6K0P9 492 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 PDPNQ86YL7 162 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 OR4C12Q96R67 309 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 SDHAF2Q9NX18 166 aa15.75■□□□□ 0.11
TSPAN3-206ENST00000559373 J3QRK9 145 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 FABP7O15540 132 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 FCGR3AP08637 254 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 CD40LGP29965 261 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 MRPS15P82914 257 aaKnown RBP15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 SSX1Q16384 188 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 PRSS48Q7RTY5 328 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 OR6Q1Q8NGQ2 317 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 RAB3CQ96E17 227 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 CNBD2Q96M20 576 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 RCHY1Q96PM5 261 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 ADAM30Q9UKF2 790 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 ELF5Q9UKW6 265 aaPredicted RBP15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 RAB22AQ9UL26 194 aa15.74■□□□□ 0.11
TSPAN3-206ENST00000559373 BVESQ8NE79 360 aa15.73■□□□□ 0.11
TSPAN3-206ENST00000559373 OR4A4PQ8NGN8 299 aa15.73■□□□□ 0.11
TSPAN3-206ENST00000559373 C13orf42A0A1B0GVH6 325 aa15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 SRRM4A7MD48 611 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 SPDEFO95238 335 aa15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 PSMA1P25786 263 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 OR10J5Q8NHC4 309 aa15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 HARBI1Q96MB7 349 aa15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 SLA2Q9H6Q3 261 aa15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 RBM7Q9Y580 266 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-206ENST00000559373 IGKV1D-8A0A087WSZ0 117 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 SHOXO15266 292 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 CRYGBP07316 175 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 IDO2Q6ZQW0 420 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 POC5Q8NA72 575 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 OR10R2Q8NGX6 335 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 ACOT13Q9NPJ3 140 aa15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 GAR1Q9NY12 217 aaKnown RBP15.71■□□□□ 0.11
TSPAN3-206ENST00000559373 TRBV12-3P01733 135 aa15.7■□□□□ 0.1
TSPAN3-206ENST00000559373 MRGPRG-AS1Q2M3A8 158 aa15.7■□□□□ 0.1
TSPAN3-206ENST00000559373 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.7■□□□□ 0.1
TSPAN3-206ENST00000559373 GINS4Q9BRT9 223 aa15.7■□□□□ 0.1
TSPAN3-206ENST00000559373 CABLES2Q9BTV7 478 aa15.7■□□□□ 0.1
TSPAN3-206ENST00000559373 TENM2Q9NT68 2774 aa15.7■□□□□ 0.1
TSPAN3-206ENST00000559373 TRBV6-7A0A0A0MS04 114 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 RAB27BO00194 218 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 MFNGO00587 321 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 RBMXL2O75526 392 aaKnown RBP15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 SERPINB10P48595 397 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 TAGLNQ01995 201 aaKnown RBP15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 ARFRP1Q13795 201 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 IZUMO2Q6UXV1 221 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 NR2C2APQ86WQ0 139 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 ANKRD13BQ86YJ7 626 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 PHB2Q99623 299 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 ELOVL1Q9BW60 279 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 COA4Q9NYJ1 87 aa15.69■□□□□ 0.1
TSPAN3-206ENST00000559373 IFITM5A6NNB3 132 aa15.68■□□□□ 0.1
TSPAN3-206ENST00000559373 LINC00473A8K010 186 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms