RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KLHL30-AS1Q8NEE0 82 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 BEST4Q8NFU0 473 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 OR13F1Q8NGS4 319 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ABHD5Q8WTS1 349 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 NUDCD2Q8WVJ2 157 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 ACOT12Q8WYK0 555 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 MAFIPQ8WZ33 124 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 BORCS5Q969J3 196 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 CYYR1Q96J86 154 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 CMTM3Q96MX0 182 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 HSPB9Q9BQS6 159 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 DCUN1D5Q9BTE7 237 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 MCRIP2Q9BUT9 160 aaKnown RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 MRPS26Q9BYN8 205 aaKnown RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 GPR61Q9BZJ8 451 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 TOLLIPQ9H0E2 274 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 PARP12Q9H0J9 701 aaKnown RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 OR51J1Q9H342 316 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 IFT46Q9NQC8 304 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 PARP11Q9NR21 331 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 SLC35D1Q9NTN3 355 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 NECAP2Q9NVZ3 263 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 SDHAF2Q9NX18 166 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 COMMD3Q9UBI1 195 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 METTL1Q9UBP6 276 aaKnown RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 ZNF580Q9UK33 172 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 MRPS7Q9Y2R9 242 aaKnown RBP3.45□□□□□ -1.86
SNX1-205ENST00000559339 PRELID3BQ9Y3B1 194 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 OR2W1Q9Y3N9 320 aa3.45□□□□□ -1.86
SNX1-205ENST00000559339 IGHV7-81A0A0B4J1V7 117 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TRAV41A0A0B4J266 112 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 A0A1W2PN81 502 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TRIM64CA6NLI5 447 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 LINC01548A6NM66 108 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 FAM25AB3EWG3 89 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 FAM25CB3EWG5 89 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 FAM25GB3EWG6 89 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 J3QRK9 145 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 LCE2BO14633 110 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ATP6V0E1O15342 81 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 SLC25A17O43808 307 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 NOL3O60936 208 aaKnown RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 TUSC2O75896 110 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 IGHG4P01861 327 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 APOA1P02647 267 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 NFYAP23511 347 aaPredicted RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 CNTFRP26992 372 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 PSMB8P28062 276 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 S100GP29377 79 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 FCGR2CP31995 323 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 PRSS3P35030 304 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 CHRNA7P36544 502 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TGFBR1P36897 503 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 CDX1P47902 265 aaPredicted RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 THBS3P49746 956 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TAS2R46P59540 309 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 NCS1P62166 190 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 RPL23AP62750 156 aaKnown RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 CX3CL1P78423 397 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ECSCRQ19T08 205 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 VMA21Q3ZAQ7 101 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ACTBL2Q562R1 376 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TCTEX1D4Q5JR98 221 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 GPR107Q5VW38 600 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 HIST2H2BDQ6DRA6 164 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 C10orf99Q6UWK7 81 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 KCTD9Q7L273 389 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 REC114Q7Z4M0 266 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 PPP1R27Q86WC6 154 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ANKRD13BQ86YJ7 626 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ZNF383Q8NA42 475 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 POC5Q8NA72 575 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 WFDC9Q8NEX5 89 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 OR5AP2Q8NGF4 316 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 OR5M8Q8NGP6 311 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 OR5H6Q8NGV6 325 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 VSTM2AQ8TAG5 236 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 OSR1Q8TAX0 266 aaPredicted RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 C15orf40Q8WUR7 153 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 C4orf3Q8WVX3 66 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ARPC1AQ92747 370 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 DPF1Q92782 380 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 SLC25A38Q96DW6 304 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 RCC1LQ96I51 464 aaKnown RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 RITA1Q96K30 269 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 UBE2E2Q96LR5 201 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 HARBI1Q96MB7 349 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TMEM68Q96MH6 324 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 CLCC1Q96S66 551 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 HSD17B10Q99714 261 aaKnown RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 AIFM2Q9BRQ8 373 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 FBXL15Q9H469 300 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 AUNIPQ9H7T9 357 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ZNF355PQ9NSJ1 428 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 ZMAT5Q9UDW3 170 aaKnown RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 ELF5Q9UKW6 265 aaPredicted RBP3.44□□□□□ -1.86
SNX1-205ENST00000559339 WSB1Q9Y6I7 421 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 A3GALT2U3KPV4 340 aa3.44□□□□□ -1.86
SNX1-205ENST00000559339 TET2Q6N021 2002 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms