RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ZNF251Q9BRH9 671 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 BARX1Q9HBU1 254 aaPredicted RBP10.65□□□□□ -0.71
SMAD3-207ENST00000558763 UNC79Q9P2D8 2635 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 CACNG5Q9UF02 275 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 PIGBOS1A0A0B4J2F0 54 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 IGSF23A1L1A6 192 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 LYNX1G3V0Z9 82 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 SSSCA1O60232 199 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 GPR137BO60478 399 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 S1PR2O95136 353 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 GAPDHP04406 335 aaKnown RBP10.64□□□□□ -0.71
SMAD3-207ENST00000558763 LYNX1P0DP58 116 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 NDUFB7P17568 137 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 COL8A2P25067 703 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-207ENST00000558763 CATR1Q13166 79 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 RPL39P5Q59GN2 51 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 GPR157Q5UAW9 335 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 NCR3LG1Q68D85 454 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 SPAG16Q8N0X2 631 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 ABHD14AQ9BUJ0 271 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 REG4Q9BYZ8 158 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 RAB1BQ9H0U4 201 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 WFDC1Q9HC57 220 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 IDI2-AS1Q9NZ38 188 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 RPUSD1Q9UJJ7 312 aaKnown RBP10.64□□□□□ -0.71
SMAD3-207ENST00000558763 MALRD1Q5VYJ5 2156 aa10.64□□□□□ -0.71
SMAD3-207ENST00000558763 TAAR5O14804 337 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 NDUFS7O75251 213 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 NXPH3O95157 252 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 TPT1P13693 172 aaKnown RBP10.63□□□□□ -0.71
SMAD3-207ENST00000558763 GPR12P47775 334 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 AKR1C2P52895 323 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 ERVFRD-1P60508 538 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 RAB14P61106 215 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-207ENST00000558763 MIDNQ504T8 468 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 PRAMEF5Q5TYX0 476 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 TCTEX1D1Q8N7M0 179 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 DDB2Q92466 427 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 SLC25A32Q9H2D1 315 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 LYRM2Q9NU23 88 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-207ENST00000558763 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 COA4Q9NYJ1 87 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 TAS2R3Q9NYW6 316 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 A0A1W2PPE3 182 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 hADV38S2A0JD32 116 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 FSTL3O95633 263 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 DLX6P56179 175 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 RPL31P62899 125 aaKnown RBP10.63□□□□□ -0.71
SMAD3-207ENST00000558763 EWSR1Q01844 656 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMAD3-207ENST00000558763 NHLH2Q02577 135 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 TMEM200BQ69YZ2 307 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 COMMD7Q86VX2 200 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 CITED4Q96RK1 184 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 ARV1Q9H2C2 271 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 MMP24Q9Y5R2 645 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 VPS13CQ709C8 3753 aa10.63□□□□□ -0.71
SMAD3-207ENST00000558763 SAA2-SAA4A0A096LPE2 208 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 FAM24AA6NFZ4 105 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 DVL1O14640 695 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 FGF16O43320 207 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 CHST1O43916 411 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 IGHV2-70P01814 119 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 FAM157CP0CG43 387 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 SAA2P0DJI9 122 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-207ENST00000558763 MMP9P14780 707 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 CCL3L1P16619 93 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 G6PCP35575 357 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 HFEQ30201 348 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 TMEM30BQ3MIR4 351 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 TMED6Q8WW62 240 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 IGFBPL1Q8WX77 278 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 SMIM3Q9BZL3 60 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 RAB9BQ9NP90 201 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
SMAD3-207ENST00000558763 ASH1LQ9NR48 2969 aaKnown RBP10.62□□□□□ -0.71
SMAD3-207ENST00000558763 OVOL3O00110 214 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 RAB7AP51149 207 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 HEPN1Q6WQI6 88 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 SLC25A48Q6ZT89 311 aaKnown RBP10.61□□□□□ -0.71
SMAD3-207ENST00000558763 TMEM252Q8N6L7 170 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 UBAC2Q8NBM4 344 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 ZNRD1Q9P1U0 126 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
SMAD3-207ENST00000558763 TET2Q6N021 2002 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-207ENST00000558763 MFSD2BA6NFX1 497 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 M0R1X1 148 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 KRASP01116 189 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 ZNF841Q6ZN19 808 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 PDZD9Q8IXQ8 264 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 OR10A7Q8NGE5 316 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 NEU4Q8WWR8 484 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-207ENST00000558763 ZC4H2Q9NQZ6 224 aa10.61□□□□□ -0.71
SMAD3-207ENST00000558763 MAP1AP78559 2803 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-207ENST00000558763 RBFOX2O43251 390 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms