RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 EI24O14681 340 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 OGG1O15527 345 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 GABRB1P18505 474 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 BMI1P35226 326 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 RHOGP84095 191 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 ANKRD55Q3KP44 614 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 YIF1BQ5BJH7 314 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 OR2G6Q5TZ20 316 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 FAM223AQ8IWN6 122 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 AGMATQ9BSE5 352 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 GHRLQ9UBU3 117 aa13.36□□□□□ -0.27
TSPAN3-204ENST00000558394 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 MAP2K4P45985 399 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 SSBP2P81877 361 aaPredicted RBP13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 FAM209BQ5JX69 171 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 C6orf201Q7Z4U5 140 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 NKAIN3Q8N8D7 197 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 ADAD2Q8NCV1 583 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 HARBI1Q96MB7 349 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 AKIP1Q9NQ31 210 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 MRPS18AQ9NVS2 196 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 BABAM2Q9NXR7 383 aa13.35□□□□□ -0.27
TSPAN3-204ENST00000558394 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 M0R1X1 148 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 SPRY2O43597 315 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 LINC00205P59089 165 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 EWSR1Q01844 656 aaKnown RBP eCLIP13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 WFDC3Q8IUB2 231 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 RHOXF1Q8NHV9 184 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 UQCC2Q9BRT2 126 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 OR1A1Q9P1Q5 309 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 ZNF230Q9UIE0 474 aaPredicted RBP13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 TP53TG1Q9Y2A0 90 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 RYR1P21817 5038 aa13.34□□□□□ -0.27
TSPAN3-204ENST00000558394 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 SHOXO15266 292 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 RBMXL2O75526 392 aaKnown RBP13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 IGLV2-23P01705 113 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 MYL12AP19105 171 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 ETV1P50549 477 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 APOC4P55056 127 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 TNXAQ16473 311 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 RIMS4Q9H426 269 aaPredicted RBP13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 FGF20Q9NP95 211 aaPredicted RBP13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 PLEKHJ1Q9NW61 149 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 MGAT4AQ9UM21 535 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 EXOSC1Q9Y3B2 195 aaKnown RBP13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 DNAH10Q8IVF4 4471 aa13.33□□□□□ -0.28
TSPAN3-204ENST00000558394 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 PROP1O75360 226 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 NAPSAO96009 420 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 PRH1P02810 166 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 CRYGBP07316 175 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 UBBP0CG47 229 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 ATF4P18848 351 aaPredicted RBP13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 DCKP27707 260 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 ZNF880Q6PDB4 577 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 Q6ZWC4 215 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 KCNG3Q8TAE7 436 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 PHLDA1Q8WV24 401 aaPredicted RBP13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 PTX4Q96A99 478 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 SLC29A1Q99808 456 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 TMEM59Q9BXS4 323 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 SELENOKQ9Y6D0 94 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
TSPAN3-204ENST00000558394 TRBV5-7A0A0A0MS05 114 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 PPP5D1E7EU14 171 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 LGALS9O00182 355 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 EDN2P20800 178 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 CBLN1P23435 193 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 HLA-DRB3P79483 266 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 MED21Q13503 144 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 DEFB135Q30KP9 77 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 VMA21Q3ZAQ7 101 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 TM4SF20Q53R12 229 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 GLT8D1Q68CQ7 371 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 ZFP41Q8N8Y5 198 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 NECAP1Q8NC96 275 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 ACOT12Q8WYK0 555 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 HECTD4Q9Y4D8 3996 aa13.31□□□□□ -0.28
TSPAN3-204ENST00000558394 IRGMA1A4Y4 181 aa13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 ZNF320A2RRD8 509 aa13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 ACTL6BO94805 426 aa13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 RASSF2P50749 326 aa13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 RPS11P62280 158 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 TAGLNQ01995 201 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 RTL8BQ17RB0 113 aa13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 CACNG8Q8WXS5 425 aa13.3□□□□□ -0.28
TSPAN3-204ENST00000558394 UBE2CO00762 179 aa13.29□□□□□ -0.28
TSPAN3-204ENST00000558394 OR2C1O95371 312 aa13.29□□□□□ -0.28
TSPAN3-204ENST00000558394 HLA-AP01891 365 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-204ENST00000558394 RPS27AP62979 156 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-204ENST00000558394 C15orf32Q32M92 178 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms