RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 MTFP1Q9UDX5 166 aa13.32□□□□□ -0.28
PBX4-202ENST00000557978 DNHD1Q96M86 4753 aa13.32□□□□□ -0.28
PBX4-202ENST00000557978 IGKV1D-13A0A0B4J2D9 117 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 IGKV1-13P0DP09 117 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 RRASP10301 218 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 AADACP22760 399 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 VDAC2P45880 294 aaPredicted RBP13.31□□□□□ -0.28
PBX4-202ENST00000557978 HERV-K104P61576 105 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 TSPAN5P62079 268 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 MMDQ15546 238 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 MSMO1Q15800 293 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 ZBTB34Q8NCN2 500 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 SECTM1Q8WVN6 248 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 RASL11BQ9BPW5 248 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 ZNF2Q9BSG1 426 aaPredicted RBP13.31□□□□□ -0.28
PBX4-202ENST00000557978 SLC35D1Q9NTN3 355 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 KIAA1456Q9P272 454 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 SIGLEC9Q9Y336 463 aa13.31□□□□□ -0.28
PBX4-202ENST00000557978 DUTP33316 252 aaKnown RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 F2RL1P55085 397 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 SHISA2Q6UWI4 295 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 FAM71E2Q8N5Q1 922 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 Q8N9W7 124 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 ZNF383Q8NA42 475 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 SMIM4Q8WVI0 70 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 HSD17B10Q99714 261 aaKnown RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 SERTAD4Q9NUC0 356 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 RBMX2Q9Y388 322 aaKnown RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 NBR2O15453 112 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 IFNA6P05013 189 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 TBPP20226 339 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 FXYD4P59646 89 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 RTL8BQ17RB0 113 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 Q6ZS46 218 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 TMEM17Q86X19 198 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 NPBQ8NG41 125 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 FLYWCH2Q96CP2 140 aaKnown RBP13.3□□□□□ -0.28
PBX4-202ENST00000557978 C5orf30Q96GV9 206 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 SOSTQ9BQB4 213 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 SLC5A7Q9GZV3 580 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 PRELID3BQ9Y3B1 194 aa13.3□□□□□ -0.28
PBX4-202ENST00000557978 TNCP24821 2201 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 NDUFA3O95167 84 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 IGLV2-14P01704 120 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 IGHG2P01859 326 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 LINC00205P59089 165 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 TAS2R19P59542 299 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 RPS16P62249 146 aaKnown RBP13.29□□□□□ -0.28
PBX4-202ENST00000557978 DGCR2P98153 550 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
PBX4-202ENST00000557978 VAX1Q5SQQ9 334 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 ZNF66Q6ZN08 573 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 KCTD9Q7L273 389 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 TMEM229BQ8NBD8 167 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 MOB3AQ96BX8 217 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 TSNAXQ99598 290 aaKnown RBP13.29□□□□□ -0.28
PBX4-202ENST00000557978 CCL28Q9NRJ3 127 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 TAS2R8Q9NYW2 309 aa13.29□□□□□ -0.28
PBX4-202ENST00000557978 SH2D7A6NKC9 451 aaPredicted RBP13.28□□□□□ -0.28
PBX4-202ENST00000557978 LINC00473A8K010 186 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 KCNAB3O43448 404 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 GSTZ1O43708 216 aaPredicted RBP13.28□□□□□ -0.28
PBX4-202ENST00000557978 CD3DP04234 171 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 CSF1P09603 554 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 VSIG10L2P0DP72 767 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 PTBP1P26599 531 aaKnown RBP eCLIP13.28□□□□□ -0.28
PBX4-202ENST00000557978 LGALS7P47929 136 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 SPANXN2Q5MJ10 180 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 FOXB2Q5VYV0 432 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 LPCAT3Q6P1A2 487 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 KLHDC1Q8N7A1 406 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 DDB2Q92466 427 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 RITA1Q96K30 269 aa13.28□□□□□ -0.28
PBX4-202ENST00000557978 SPDEFO95238 335 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 CNTFRP26992 372 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 C5orf64Q2M2E5 130 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 TMEM177Q53S58 311 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 SLC35E3Q7Z769 313 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 FOXRED2Q8IWF2 684 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 MFSD4AQ8N468 514 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 ARRDC1Q8N5I2 433 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 BVESQ8NE79 360 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.29
PBX4-202ENST00000557978 WNT10AQ9GZT5 417 aa13.27□□□□□ -0.29
PBX4-202ENST00000557978 M0QYG6 137 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 RRHO14718 337 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 CD74P04233 296 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 ETV6P41212 452 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 CATR1Q13166 79 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 PLGLAQ15195 96 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 TMEM95Q3KNT9 176 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 LIN54Q6MZP7 749 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 STEAP1BQ6NZ63 245 aa13.26□□□□□ -0.29
PBX4-202ENST00000557978 CENPVQ7Z7K6 275 aaPredicted RBP13.26□□□□□ -0.29
PBX4-202ENST00000557978 CCDC190Q86UF4 302 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms