RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CDK1P06493 297 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 CRYGBP07316 175 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 ZP3P21754 424 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 GRPEL2Q8TAA5 225 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 GFI1Q99684 422 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 URM1Q9BTM9 101 aaKnown RBP12.18□□□□□ -0.46
SCFD1-224ENST00000557713 MND1Q9BWT6 205 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 ZNF355PQ9NSJ1 428 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 ZNF221Q9UK13 617 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 A0A0G2JLM5 398 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 ANKRD34BA5PLL1 514 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 EBAG9O00559 213 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 APOA2P02652 100 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 ARSBP15848 533 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 VEGFCP49767 419 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 PJVKQ0ZLH3 352 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 P2RY14Q15391 338 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 SPHARQ15513 63 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 MOGAT2Q3SYC2 334 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 ISOC1Q96CN7 298 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 RDH8Q9NYR8 311 aa12.17□□□□□ -0.46
SCFD1-224ENST00000557713 SLC17A2O00624 439 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 CNIH1O95406 144 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 LGALS7P47929 136 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 HAGHQ16775 308 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.16□□□□□ -0.46
SCFD1-224ENST00000557713 OR9G4Q8NGQ1 327 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 ARHGAP5-AS1Q96IT6 56 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 THAP7Q9BT49 309 aaPredicted RBP12.16□□□□□ -0.46
SCFD1-224ENST00000557713 PECRQ9BY49 303 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 SLC35D1Q9NTN3 355 aa12.16□□□□□ -0.46
SCFD1-224ENST00000557713 TRDCB7Z8K6 153 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 PTGES3LE9PB15 166 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 H0Y980 276 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 M0R1X1 148 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 SYNJ2BPP57105 145 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 PLAC9Q5JTB6 97 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 OGFRL1Q5TC84 451 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-224ENST00000557713 ZNF343Q6P1L6 599 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 CMSS1Q9BQ75 279 aaKnown RBP12.15□□□□□ -0.46
SCFD1-224ENST00000557713 SPATA25Q9BR10 227 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 TINAGL1Q9GZM7 467 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-224ENST00000557713 PLGRKTQ9HBL7 147 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
SCFD1-224ENST00000557713 BIRC6Q9NR09 4857 aa12.15□□□□□ -0.46
SCFD1-224ENST00000557713 CSN3P07498 182 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 AADACP22760 399 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 IRF3Q14653 427 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 RCN1Q15293 331 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 MED22Q15528 200 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 LIPKQ5VXJ0 399 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 OR4A4PQ8NGN8 299 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 TMEM203Q969S6 136 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 SDHAF2Q9NX18 166 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 SIGLEC8Q9NYZ4 499 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 ADAM30Q9UKF2 790 aa12.14□□□□□ -0.47
SCFD1-224ENST00000557713 AK6Q9Y3D8 172 aaKnown RBP12.14□□□□□ -0.47
SCFD1-224ENST00000557713 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
SCFD1-224ENST00000557713 CASQ2O14958 399 aaPredicted RBP12.13□□□□□ -0.47
SCFD1-224ENST00000557713 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 SERPINB10P48595 397 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 MECP2P51608 486 aaKnown RBP12.13□□□□□ -0.47
SCFD1-224ENST00000557713 DEFA5Q01523 94 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 DYRK1AQ13627 763 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 C2orf76Q3KRA6 126 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 TMEM177Q53S58 311 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
SCFD1-224ENST00000557713 FABP7O15540 132 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
SCFD1-224ENST00000557713 CD3GP09693 182 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 CLDN12P56749 244 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 TAGLNQ01995 201 aaKnown RBP12.12□□□□□ -0.47
SCFD1-224ENST00000557713 TPBGQ13641 420 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 RAB11BQ15907 218 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 TATDN3Q17R31 274 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 ADAMTSL5Q6ZMM2 481 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 BVESQ8NE79 360 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 OR56B1Q8NGI3 324 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 UFD1Q92890 307 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 C5orf30Q96GV9 206 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 HARBI1Q96MB7 349 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 KCNK7Q9Y2U2 307 aa12.12□□□□□ -0.47
SCFD1-224ENST00000557713 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 IZUMO1RA6ND01 250 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 MSGN1A6NI15 193 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 DENRO43583 198 aaKnown RBP12.11□□□□□ -0.47
SCFD1-224ENST00000557713 GSTT2P0CG29 244 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 GSTT2BP0CG30 244 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 RPS25P62851 125 aaKnown RBP12.11□□□□□ -0.47
SCFD1-224ENST00000557713 PLA2G7Q13093 441 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 LCN12Q6JVE5 192 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-224ENST00000557713 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 Q8N402 240 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms