RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FLVCR2Q9UPI3 526 aa3.09□□□□□ -1.91
PRPF39-212ENST00000557477 CARHSP1Q9Y2V2 147 aaKnown RBP3.09□□□□□ -1.91
PRPF39-212ENST00000557477 UNC79Q9P2D8 2635 aa3.09□□□□□ -1.91
PRPF39-212ENST00000557477 BOD1L1Q8NFC6 3051 aa3.09□□□□□ -1.91
PRPF39-212ENST00000557477 TEX15Q9BXT5 2789 aa3.09□□□□□ -1.92
PRPF39-212ENST00000557477 SPTAN1Q13813 2472 aaKnown RBP3.09□□□□□ -1.92
PRPF39-212ENST00000557477 TDRD6O60522 2096 aaKnown RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 A0A0G2JN53 185 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CXorf51AA0A1B0GTR3 108 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 WI2-2373I1.2A0A1W2PRP0 233 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 TRAPPC13A5PLN9 417 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 COLCA2A8K830 154 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 TRAPPC2LH3BP13 241 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 RPL36A-HNRNPH2H7BZ11 118 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 GPR31O00270 319 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CCL21O00585 134 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 UBFD1O14562 309 aaKnown RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 MT-CO2P00403 227 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CFDP00746 253 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CST4P01036 141 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 PMP2P02689 132 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CRYGBP07316 175 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR8U9P0C7N5 309 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 FOLR1P15328 257 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 S100GP29377 79 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 POLR2IP36954 125 aaKnown RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 GPR1P46091 355 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CSNK1A1P48729 337 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 RAB9AP51151 201 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 NCS1P62166 190 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 FAM3AP98173 230 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 MXD1Q05195 221 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 ZNF235Q14590 738 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CLINT1Q14677 625 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 KCTD19Q17RG1 926 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 PGGHGQ32M88 737 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 LGALSLQ3ZCW2 172 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OCIAD2Q56VL3 154 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR52W1Q6IF63 320 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 LCN12Q6JVE5 192 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CNIH2Q6PI25 160 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 SMARCD3Q6STE5 483 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 TMEM107Q6UX40 140 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 DRAM2Q6UX65 266 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 AHSA2Q719I0 299 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 COX15Q7KZN9 410 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 CRLF3Q8IUI8 442 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 TRAPPC5Q8IUR0 188 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 SLC34A3Q8N130 599 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 Q8N402 240 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 FAM71E2Q8N5Q1 922 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 PROKR2Q8NFJ6 384 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR10D4PQ8NGN7 298 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR13C8Q8NGS7 320 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR4S2Q8NH73 311 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR5AK3PQ8NH89 298 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR1S1Q8NH92 325 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 GNPDA2Q8TDQ7 276 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 APH1BQ8WW43 257 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 PATE1Q8WXA2 126 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 ASB13Q8WXK3 278 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 FAM131CQ96AQ9 280 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 ASB9Q96DX5 294 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 OR52E6Q96RD3 313 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 SDHCQ99643 169 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 MED28Q9H204 178 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 WFDC1Q9HC57 220 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 INPP5EQ9NRR6 644 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 XCL2Q9UBD3 114 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 COMMD3Q9UBI1 195 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 MRM2Q9UI43 246 aaKnown RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 ZNF230Q9UIE0 474 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 USP9XQ93008 2570 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-212ENST00000557477 LRRK2Q5S007 2527 aa3.08□□□□□ -1.92
PRPF39-212ENST00000557477 KNL1Q8NG31 2342 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 NOTCH2Q04721 2471 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 TGIF2-C20orf24A0A0A6YYL0 155 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 TRAV39A0A0B4J263 110 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 TMEM213A2RRL7 107 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 OR5H14A6NHG9 310 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 ZNF726A6NNF4 738 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 EFCAB9A8MZ26 197 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 RNASEK-C17orf49H0YIS7 233 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 K7EM74 188 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 M0R036 132 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 FAAHO00519 579 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 SIVA1O15304 175 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 TSPAN13O95857 204 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 IGLV3-25P01717 112 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 ALDOBP05062 364 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 CSF3P09919 207 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 UCHL1P09936 223 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 PET100P0DJ07 73 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 ZNF35P13682 527 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 COX6B1P14854 86 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 CRHBPP24387 322 aa3.07□□□□□ -1.92
PRPF39-212ENST00000557477 BRS3P32247 399 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms