RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 MOB3AQ96BX8 217 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 RITA1Q96K30 269 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 BATF3Q9NR55 127 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 MMP24Q9Y5R2 645 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 CLPSL1A2RUU4 121 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 LINC00473A8K010 186 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 H7C2Y5 167 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 M0QZK8 103 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 FGF16O43320 207 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 SLC22A5O76082 557 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 APOA2P02652 100 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 CD74P04233 296 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 TBPP20226 339 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 CNTFRP26992 372 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 MC5RP33032 325 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 ETV6P41212 452 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 F2RL1P55085 397 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 TAS2R19P59542 299 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 MMDQ15546 238 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 TMEM95Q3KNT9 176 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 ABCA11PQ4W5N1 156 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 PYDC2Q56P42 97 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 C11orf88Q6PI97 169 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 PDPNQ86YL7 162 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 Q8N9W7 124 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 OR4D10Q8NGI6 311 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 OR6F1Q8NGZ6 308 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 DDB2Q92466 427 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 BEX1Q9HBH7 125 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 PLSCR3Q9NRY6 295 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 ZNF107Q9UII5 783 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-210ENST00000557466 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 RAB3DO95716 219 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 IGKV1-16P04430 117 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 CSF1P09603 554 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 PTBP1P26599 531 aaKnown RBP eCLIP11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 TSPAN5P62079 268 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 MSMO1Q15800 293 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 SPANXN2Q5MJ10 180 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 FAAP20Q6NZ36 180 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 STEAP1BQ6NZ63 245 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 C12orf54Q6X4T0 127 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 ZNF818PQ6ZRF7 136 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 KCTD9Q7L273 389 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 BVESQ8NE79 360 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 OR8H1Q8NGG4 311 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 OR2T6Q8NHC8 308 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 TRIM63Q969Q1 353 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 GPHA2Q96T91 129 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 TAS2R8Q9NYW2 309 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 RNF114Q9Y508 228 aa11.8□□□□□ -0.52
VIPAS39-210ENST00000557466 A0A1B0GUS0 222 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 ANKRD20A5PA0PJZ0 165 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 NBR2O15453 112 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 TNFSF12O43508 249 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 PROK1P58294 105 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 C9orf152Q5JTZ5 239 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 FAM71E2Q8N5Q1 922 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 HSD17B10Q99714 261 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 SRRQ9GZT4 340 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 SERTAD4Q9NUC0 356 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 COL6A5A8TX70 2615 aa11.79□□□□□ -0.52
VIPAS39-210ENST00000557466 PEX14O75381 377 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 NDUFA3O95167 84 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 IFNA6P05013 189 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 ZNF735P0CB33 412 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 GNRHRP30968 328 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 ARSJQ5FYB0 599 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 AADACL3Q5VUY0 350 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 ZNF66Q6ZN08 573 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 Q8N402 240 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 ZBTB34Q8NCN2 500 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 NPBQ8NG41 125 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 OR4C16Q8NGL9 310 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 TCTEX1D2Q8WW35 142 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
VIPAS39-210ENST00000557466 HAX1O00165 279 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 TAGLNQ01995 201 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 MEF2DQ14814 521 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 MFSD4AQ8N468 514 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 SPATA3Q8NHX4 192 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 FLYWCH2Q96CP2 140 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 RASL11BQ9BPW5 248 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 FBXL15Q9H469 300 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 PTTG2Q9NZH5 202 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms