RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PHYHD1Q5SRE7 291 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 C1orf100Q5SVJ3 147 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 BCL2L15Q5TBC7 163 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 FBXW9Q5XUX1 488 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 TMEM42Q69YG0 159 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 SFXN4Q6P4A7 337 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 XKRXQ6PP77 449 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 PGAP1Q75T13 922 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 SKA3Q8IX90 412 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 TMEM252Q8N6L7 170 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 GDPD1Q8N9F7 314 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 OR1F12Q8NHA8 337 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 NANPQ8TBE9 248 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 FAM57AQ8TBR7 257 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 THEM6Q8WUY1 208 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 PP6455Q8WZ26 134 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 SPTSSAQ969W0 71 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 TMEM106AQ96A25 262 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 CPNE2Q96FN4 548 aaPredicted RBP2.23□□□□□ -2.05
VRK1-207ENST00000557352 ZNF75AQ96N20 296 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 AMELYQ99218 206 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 TBX5Q99593 518 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 SLC6A7Q99884 636 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 KCNS3Q9BQ31 491 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 PDCD1LG2Q9BQ51 273 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 TMED9Q9BVK6 235 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 SFXN3Q9BWM7 321 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 OR2H1Q9GZK4 316 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 ABCG5Q9H222 651 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 NARFLQ9H6Q4 476 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 METTL17Q9H7H0 456 aaPredicted RBP2.23□□□□□ -2.05
VRK1-207ENST00000557352 RHOFQ9HBH0 211 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 ABCB9Q9NP78 766 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 EXOSC4Q9NPD3 245 aaKnown RBP2.23□□□□□ -2.05
VRK1-207ENST00000557352 B3GNT2Q9NY97 397 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 CKLFQ9UBR5 152 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 OR52A1Q9UKL2 312 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 IKZF2Q9UKS7 526 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 POLR1DQ9Y2S0 133 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 V9GY05 133 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 V9GYS6 101 aa2.23□□□□□ -2.05
VRK1-207ENST00000557352 USP9XQ93008 2570 aaPredicted RBP2.23□□□□□ -2.05
VRK1-207ENST00000557352 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.23□□□□□ -2.05
VRK1-207ENST00000557352 FLNCQ14315 2725 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 KMT2BQ9UMN6 2715 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 ZFYVE26Q68DK2 2539 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 MALRD1Q5VYJ5 2156 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 AKAP6Q13023 2319 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 IGHV1OR15-1A0A075B7D0 117 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 IGHV3-15A0A0B4J1V0 119 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 A0A1B0GVI7 797 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 LOC107986453A0A1B0GWG9 222 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 A0A1B0GWJ7 208 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 HELTA6NFD8 242 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 M0R135 149 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 RER1O15258 196 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 PIN1P1O15428 100 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 GSTZ1O43708 216 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 UPK1BO75841 260 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TNFSF13O75888 250 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 MPZL1O95297 269 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TGM6O95932 706 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 PTTG1O95997 202 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 F10P00742 488 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 UBBP0CG47 229 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ZNF14P17017 642 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 ATF1P18846 271 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 OPRM1P35372 400 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TGFBR1P36897 503 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TALDO1P37837 337 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 RFC3P40938 356 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 RPS27P42677 84 aaKnown RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 CX3CR1P49238 355 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 HCCSP53701 268 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ZNF121P58317 390 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 HERVK_113P61574 105 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 LSM3P62310 102 aaKnown RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 PSG4Q00888 419 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 KLRB1Q12918 225 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ARL6IP1Q15041 203 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 LINC00303Q3SY05 128 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 FBXL19-AS1Q494R0 122 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 UBE2NLQ5JXB2 153 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 C1orf185Q5T7R7 199 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TSPO2Q5TGU0 170 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 CARD17Q5XLA6 110 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 GLT8D1Q68CQ7 371 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 NCR3LG1Q68D85 454 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 PYHIN1Q6K0P9 492 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TMEM53Q6P2H8 277 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 FBXW12Q6X9E4 464 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 SLC16A14Q7RTX9 510 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 OR2W3Q7Z3T1 314 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 GABRG1Q8N1C3 465 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 FTMTQ8N4E7 242 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ZNF676Q8N7Q3 588 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ZFP41Q8N8Y5 198 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ST6GALNAC3Q8NDV1 305 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 OR10A7Q8NGE5 316 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms