RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ZNF737O75373 536 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ZNF205O95201 554 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 PRH1P02810 166 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 CD3EP07766 207 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 SLC25A6P12236 298 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 RND2P52198 227 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 RELQ04864 619 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ZNF616Q08AN1 781 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ZNF506Q5JVG8 444 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 C22orf34Q6ZV56 151 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 COQ2Q96H96 371 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 WFIKKN1Q96NZ8 548 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 NIPSNAP3BQ9BS92 247 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ACTR3CQ9C0K3 210 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-229ENST00000557348 MS4A5Q9H3V2 200 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 GCM1Q9NP62 436 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 CCL28Q9NRJ3 127 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 PPP1R3CQ9UQK1 317 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 TRBV24-1A0A075B6N3 115 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 HSD17B6O14756 317 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ST8SIA3O43173 380 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 PGLYRP1O75594 196 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-229ENST00000557348 VDAC1P21796 283 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-229ENST00000557348 NDUFA6P56556 154 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 AESQ08117 197 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ELOBQ15370 118 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 CR1LQ2VPA4 569 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 SP6Q3SY56 376 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ZNF645Q8N7E2 425 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 SLC25A31Q9H0C2 315 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 PLEKHF2Q9H8W4 249 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 PLA2G2EQ9NZK7 142 aa10.57□□□□□ -0.72
SHMT2-229ENST00000557348 ZZEF1O43149 2961 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 A0A087X0M5 115 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 A0A1B0GX30 115 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 A0A1W2PPE2 198 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 CLEC18AA5D8T8 446 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 GCGP01275 180 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 HBZP02008 142 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 SERPINE2P07093 398 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 EGR1P18146 543 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 UBE2KP61086 200 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 BAXQ07812 192 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 CATR1Q13166 79 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 PMS2P11Q13670 270 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 GNMTQ14749 295 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-229ENST00000557348 EFNB3Q15768 340 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 COA6Q5JTJ3 125 aaKnown RBP10.56□□□□□ -0.72
SHMT2-229ENST00000557348 C9orf152Q5JTZ5 239 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 TEX36Q5VZQ5 186 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 SP5Q6BEB4 398 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-229ENST00000557348 FAM219AQ8IW50 185 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 PRR18Q8N4B5 295 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 SLC35G3Q8N808 338 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 CLEC18CQ8NCF0 446 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 ZNF665Q9H7R5 613 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 PRR13Q9NZ81 148 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 OR1A1Q9P1Q5 309 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
SHMT2-229ENST00000557348 FAM208BQ5VWN6 2430 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
SHMT2-229ENST00000557348 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 ODAMA1E959 279 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 SMCO3A2RU48 225 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 NKX6-3A6NJ46 265 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 B9A039 149 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 H3BQ15 152 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 OPN1MWP04001 364 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 ARG1P05089 322 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 APOBEC3AP31941 199 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-229ENST00000557348 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
SHMT2-229ENST00000557348 TLE1Q04724 770 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 TLE4Q04727 773 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 ZNF674Q2M3X9 581 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 MEX3BQ6ZN04 569 aaKnown RBP10.55□□□□□ -0.72
SHMT2-229ENST00000557348 ETV3LQ6ZN32 361 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 LYZL2Q7Z4W2 148 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 OR10D4PQ8NGN7 298 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 BTF3L4Q96K17 158 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 RNF150Q9ULK6 438 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 ESPL1Q14674 2120 aa10.55□□□□□ -0.72
SHMT2-229ENST00000557348 TRAV38-1A0A0B4J264 116 aa10.54□□□□□ -0.72
SHMT2-229ENST00000557348 IFITM10A6NMD0 228 aa10.54□□□□□ -0.72
SHMT2-229ENST00000557348 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
SHMT2-229ENST00000557348 KCNAB3O43448 404 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms