RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 AUNIPQ9H7T9 357 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 METTL1Q9UBP6 276 aaKnown RBP8.13□□□□□ -1.11
SNX6-208ENST00000556712 DNAH3Q8TD57 4116 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 LINC00473A8K010 186 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 FCN1O00602 326 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 SLC25A17O43808 307 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 RBBP9O75884 186 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 CA2P00918 260 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 IGF1P05019 195 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
SNX6-208ENST00000556712 IGLL1P15814 213 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 CD33P20138 364 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 ARPC4P59998 168 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 RPS16P62249 146 aaKnown RBP8.12□□□□□ -1.11
SNX6-208ENST00000556712 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 CXorf66Q5JRM2 361 aaPredicted RBP8.12□□□□□ -1.11
SNX6-208ENST00000556712 GPR107Q5VW38 600 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 TEX38Q6PEX7 206 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 CNIH2Q6PI25 160 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 CROCCP3Q8IVE0 287 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 BVESQ8NE79 360 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 BEST4Q8NFU0 473 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 ABHD5Q8WTS1 349 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 CASTOR1Q8WTX7 329 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 FAM103A1Q9BTL3 118 aaKnown RBP8.12□□□□□ -1.11
SNX6-208ENST00000556712 MRPS26Q9BYN8 205 aaKnown RBP8.12□□□□□ -1.11
SNX6-208ENST00000556712 DCSTAMPQ9H295 470 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 DIABLOQ9NR28 239 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 ANXA10Q9UJ72 324 aa8.12□□□□□ -1.11
SNX6-208ENST00000556712 A0A0A6YYH2 397 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 TRAV41A0A0B4J266 112 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 A6NJ64 397 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 XRCC3O43542 346 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 GABARAPO95166 117 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 IGLV2-23P01705 113 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 IGHG4P01861 327 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
SNX6-208ENST00000556712 DUTP33316 252 aaKnown RBP8.11□□□□□ -1.11
SNX6-208ENST00000556712 THBS3P49746 956 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 LUMP51884 338 aaPredicted RBP8.11□□□□□ -1.11
SNX6-208ENST00000556712 TAS2R20P59543 309 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 CX3CL1P78423 397 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 FOXE3Q13461 319 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 OR2B11Q5JQS5 317 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 TMEM69Q5SWH9 247 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 HOGA1Q86XE5 327 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 ZNF695Q8IW36 515 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 COMMD1Q8N668 190 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 LINC00482Q8N8I6 264 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 DDB2Q92466 427 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 SNAPC3Q92966 411 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 FLYWCH2Q96CP2 140 aaKnown RBP8.11□□□□□ -1.11
SNX6-208ENST00000556712 HARBI1Q96MB7 349 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 GON7Q9BXV9 100 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 KLK15Q9H2R5 256 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 COMMD3Q9UBI1 195 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 OR2W1Q9Y3N9 320 aa8.11□□□□□ -1.11
SNX6-208ENST00000556712 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 A0A1W2PN81 502 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 ARPC1BO15143 372 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 SOX15O60248 233 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 TMEM127O75204 238 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 TUSC2O75896 110 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 SPDEFO95238 335 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 CRYZL1O95825 349 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 IGLV2-14P01704 120 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 HLA-DQB1P01920 261 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 ELANEP08246 267 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 CTXN2P0C2S0 81 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 AADACP22760 399 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 PSMB8P28062 276 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 CHRNA7P36544 502 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 GNB1P62873 340 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 RPL30P62888 115 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 SSBP2P81877 361 aaPredicted RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 PJVKQ0ZLH3 352 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 CTF1Q16619 201 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 RTL8BQ17RB0 113 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 PDLIM3Q53GG5 364 aaPredicted RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 C19orf54Q5BKX5 351 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 KCTD9Q7L273 389 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 ANKRD13BQ86YJ7 626 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 MRPL41Q8IXM3 137 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 ZNF645Q8N7E2 425 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 GRPEL2Q8TAA5 225 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 S100A16Q96FQ6 103 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 RAX2Q96IS3 184 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 GPHA2Q96T91 129 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 TSNAXQ99598 290 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 IFT46Q9NQC8 304 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 ZFP57Q9NU63 452 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
SNX6-208ENST00000556712 RBMX2Q9Y388 322 aaKnown RBP8.1□□□□□ -1.11
SNX6-208ENST00000556712 SRRM4A7MD48 611 aaKnown RBP8.09□□□□□ -1.11
SNX6-208ENST00000556712 SHOXO15266 292 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 TNFSF12O43508 249 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 HPGDSO60760 199 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 OR5H8P0DN80 308 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms