RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SPDEFO95238 335 aa17.44■□□□□ 0.38
ACTN1-220ENST00000556433 HSPB1P04792 205 aaKnown RBP17.44■□□□□ 0.38
ACTN1-220ENST00000556433 CD3GP09693 182 aa17.44■□□□□ 0.38
ACTN1-220ENST00000556433 SERPINB10P48595 397 aa17.44■□□□□ 0.38
ACTN1-220ENST00000556433 TPPP2P59282 170 aa17.44■□□□□ 0.38
ACTN1-220ENST00000556433 MRPS15P82914 257 aaKnown RBP17.44■□□□□ 0.38
ACTN1-220ENST00000556433 OR4A4PQ8NGN8 299 aa17.44■□□□□ 0.38
ACTN1-220ENST00000556433 RHOVQ96L33 236 aa17.44■□□□□ 0.38
ACTN1-220ENST00000556433 FABP7O15540 132 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 SLC25A17O43808 307 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 SPNP16150 400 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 FXYD3Q14802 87 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 ARPC1AQ92747 370 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 RAB3CQ96E17 227 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 SLA2Q9H6Q3 261 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 SLC35D1Q9NTN3 355 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 KCNK7Q9Y2U2 307 aa17.43■□□□□ 0.38
ACTN1-220ENST00000556433 BET1O15155 118 aa17.42■□□□□ 0.38
ACTN1-220ENST00000556433 TRGV3P03979 118 aa17.42■□□□□ 0.38
ACTN1-220ENST00000556433 OR8U9P0C7N5 309 aa17.42■□□□□ 0.38
ACTN1-220ENST00000556433 ACSM6Q6P461 480 aa17.42■□□□□ 0.38
ACTN1-220ENST00000556433 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.42■□□□□ 0.38
ACTN1-220ENST00000556433 GRPEL2Q8TAA5 225 aa17.42■□□□□ 0.38
ACTN1-220ENST00000556433 ZNF355PQ9NSJ1 428 aa17.42■□□□□ 0.38
ACTN1-220ENST00000556433 PDCD5O14737 125 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 ARPC1BO15143 372 aaKnown RBP17.41■□□□□ 0.38
ACTN1-220ENST00000556433 CNIH1O95406 144 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 GSTT2P0CG29 244 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 GSTT2BP0CG30 244 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 MOGAT2Q3SYC2 334 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 IGSF11Q5DX21 431 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 OR5T1Q8NG75 326 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 OR6Q1Q8NGQ2 317 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 OR4C12Q96R67 309 aa17.41■□□□□ 0.38
ACTN1-220ENST00000556433 PITPNAQ00169 270 aa17.4■□□□□ 0.38
ACTN1-220ENST00000556433 OR10R2Q8NGX6 335 aa17.4■□□□□ 0.38
ACTN1-220ENST00000556433 OR10J5Q8NHC4 309 aa17.4■□□□□ 0.38
ACTN1-220ENST00000556433 OR2D2Q9H210 308 aa17.4■□□□□ 0.38
ACTN1-220ENST00000556433 SDHAF2Q9NX18 166 aa17.4■□□□□ 0.38
ACTN1-220ENST00000556433 FCGR3AP08637 254 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 GP9P14770 177 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 GNB3P16520 340 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 GADD45AP24522 165 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 LGALS7P47929 136 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 OR10A3P58181 314 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 PJVKQ0ZLH3 352 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 SSX1Q16384 188 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 CABLES2Q9BTV7 478 aa17.39■□□□□ 0.37
ACTN1-220ENST00000556433 A0A075B6Q4 140 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 TRBV6-7A0A0A0MS04 114 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 TRAV1-2A0A0B4J238 106 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 SHISA3A0PJX4 238 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 IGLV2-23P01705 113 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 TBCEQ15813 527 aaPredicted RBP17.38■□□□□ 0.37
ACTN1-220ENST00000556433 ZNF367Q7RTV3 350 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 OVCH2Q7RTZ1 564 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 SBSPONQ8IVN8 264 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 POC5Q8NA72 575 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 MAFIPQ8WZ33 124 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 CNBD2Q96M20 576 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 VCX3BQ9H321 246 aa17.38■□□□□ 0.37
ACTN1-220ENST00000556433 ZNF230Q9UIE0 474 aaPredicted RBP17.38■□□□□ 0.37
ACTN1-220ENST00000556433 C13orf42A0A1B0GVH6 325 aa17.37■□□□□ 0.37
ACTN1-220ENST00000556433 IFITM5A6NNB3 132 aa17.37■□□□□ 0.37
ACTN1-220ENST00000556433 CRYGBP07316 175 aa17.37■□□□□ 0.37
ACTN1-220ENST00000556433 BVESQ8NE79 360 aa17.37■□□□□ 0.37
ACTN1-220ENST00000556433 ELOVL1Q9BW60 279 aa17.37■□□□□ 0.37
ACTN1-220ENST00000556433 RBM7Q9Y580 266 aaKnown RBP17.37■□□□□ 0.37
ACTN1-220ENST00000556433 H3BUA1 57 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 RAB27BO00194 218 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 MFNGO00587 321 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 HIST1H1DP16402 221 aaKnown RBP17.36■□□□□ 0.37
ACTN1-220ENST00000556433 RAB6AP20340 208 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 MYL9P24844 172 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 SSBP2P81877 361 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-220ENST00000556433 TAGLNQ01995 201 aaKnown RBP17.36■□□□□ 0.37
ACTN1-220ENST00000556433 CBX3Q13185 183 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 IZUMO2Q6UXV1 221 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 HARBI1Q96MB7 349 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 GINS4Q9BRT9 223 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 RANGRFQ9HD47 186 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-220ENST00000556433 BLOC1S6Q9UL45 172 aa17.36■□□□□ 0.37
ACTN1-220ENST00000556433 A0A0G2JLM5 398 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 TRDV1A0A1B0GX56 115 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 ANKRD34BA5PLL1 514 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 METTL21EPA6NDL7 271 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 ERICH4A6NGS2 130 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 TRIM64CA6NLI5 447 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 SHOXO15266 292 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 DIRAS3O95661 229 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 FRMD6-AS1P0C7T7 363 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 RAB3BP20337 219 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 TALDO1P37837 337 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 HSPA13P48723 471 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 ARFRP1Q13795 201 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 RTL8BQ17RB0 113 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 TMEM177Q53S58 311 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 HAPLN4Q86UW8 402 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 C5orf30Q96GV9 206 aa17.35■□□□□ 0.37
ACTN1-220ENST00000556433 TMEM68Q96MH6 324 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms