RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 C9orf170A2RU37 121 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 OOSP1A8MZH6 123 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 H0Y980 276 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 CREBL2O60519 120 aaPredicted RBP8.94□□□□□ -0.98
TMEM260-208ENST00000555905 PROP1O75360 226 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 SFT2D2O95562 160 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 IGHV4-38-2P0DP08 117 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 DUTP33316 252 aaKnown RBP8.94□□□□□ -0.98
TMEM260-208ENST00000555905 SAA4P35542 130 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 KIR2DS2P43631 304 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 REG1BP48304 166 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 ARHGDIBP52566 201 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 BPIFB3P59826 476 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 TAGLNQ01995 201 aaKnown RBP8.94□□□□□ -0.98
TMEM260-208ENST00000555905 ZNF816Q0VGE8 651 aaPredicted RBP8.94□□□□□ -0.98
TMEM260-208ENST00000555905 CBX3Q13185 183 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 DHRS2Q13268 280 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 SLC9A3R2Q15599 337 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 TCTEX1D1Q8N7M0 179 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 NANPQ8TBE9 248 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 CD300LFQ8TDQ1 290 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 ZNF431Q8TF32 576 aaPredicted RBP8.94□□□□□ -0.98
TMEM260-208ENST00000555905 CASTOR1Q8WTX7 329 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 MALSU1Q96EH3 234 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 SEC22CQ9BRL7 303 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 MRPL20Q9BYC9 149 aaKnown RBP8.94□□□□□ -0.98
TMEM260-208ENST00000555905 ALG5Q9Y673 324 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 ABCA1O95477 2261 aa8.94□□□□□ -0.98
TMEM260-208ENST00000555905 A0A0A6YYJ9 748 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 LINC00473A8K010 186 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 SNRPGP15A8MWD9 76 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 DUS4LO95620 317 aaKnown RBP8.93□□□□□ -0.98
TMEM260-208ENST00000555905 APOA2P02652 100 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 SERPINE2P07093 398 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 OR5AC1P0C628 307 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 CT45A6P0DMU7 189 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 CT45A5P0DMU8 189 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 CT45A7P0DMV0 189 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 RPL30P62888 115 aaKnown RBP8.93□□□□□ -0.98
TMEM260-208ENST00000555905 SUPT4H1P63272 117 aaKnown RBP8.93□□□□□ -0.98
TMEM260-208ENST00000555905 SRPXP78539 464 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 DIAPH2-AS1Q14236 149 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 SSX2Q16385 188 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 RTL8BQ17RB0 113 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 SP6Q3SY56 376 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 OR2B11Q5JQS5 317 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 C1orf229Q6ZS94 237 aaPredicted RBP8.93□□□□□ -0.98
TMEM260-208ENST00000555905 LHFPL4Q7Z7J7 247 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 MOB3BQ86TA1 216 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 OR8H3Q8N146 312 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 OR52B4Q8NGK2 314 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 COQ8AQ8NI60 647 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 GALNT14Q96FL9 552 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 TP53RKQ96S44 253 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 PHB2Q99623 299 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 YAE1D1Q9NRH1 226 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 FAM96BQ9Y3D0 163 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 HILPDAQ9Y5L2 63 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 ZANQ9Y493 2812 aa8.93□□□□□ -0.98
TMEM260-208ENST00000555905 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 A0A0B4J293 547 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 IGHV1-3A0A0C4DH29 117 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 C7orf66A4D0T2 115 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 H7C2Y5 167 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 SSNA1O43805 119 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 FCGR3BO75015 233 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 RRASP10301 218 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 CD99P14209 185 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 FOSL1P15407 271 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 MC5RP33032 325 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 RAB13P51153 203 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 KRTAP1-1Q07627 177 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 KLF17Q5JT82 389 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-208ENST00000555905 LDLRAD2Q5SZI1 272 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 RUSC1-AS1Q66K80 236 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 DHRS7BQ6IAN0 325 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-208ENST00000555905 BRD3OSQ6XYD6 125 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 SPAG16Q8N0X2 631 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 LGI3Q8N145 548 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 ZNF383Q8NA42 475 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 UXS1Q8NBZ7 420 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 OR4S2Q8NH73 311 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 MITD1Q8WV92 249 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 NABP2Q9BQ15 211 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 TMEM222Q9H0R3 208 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 OR51J1Q9H342 316 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 FAM212BQ9NTI7 297 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-208ENST00000555905 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 NUP50Q9UKX7 468 aa8.92□□□□□ -0.98
TMEM260-208ENST00000555905 A8MV72 311 aaPredicted RBP8.91□□□□□ -0.98
TMEM260-208ENST00000555905 H0YJW9 148 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 TIMM23O14925 209 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 RBFOX2O43251 390 aaKnown RBP eCLIP8.91□□□□□ -0.98
TMEM260-208ENST00000555905 ATG12O94817 140 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 RPA2P15927 270 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 HNF1AP20823 631 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 UCP1P25874 307 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms