RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SELLP14151 372 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 SERF2P84101 59 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 ZNF124Q15973 351 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 SPNS3Q6ZMD2 512 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 MBD3L1Q8WWY6 194 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 DOK5Q9P104 306 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 WNT2P09544 360 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 VHLLQ6RSH7 139 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 VAX2Q9UIW0 290 aa13.11□□□□□ -0.31
ARHGEF40-203ENST00000554514 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 LRP11Q86VZ4 500 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 ZNF251Q9BRH9 671 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 GSN-AS1Q9NRJ2 163 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 MIOXQ9UGB7 285 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 MAS1LP35410 378 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 DEFB109BQ30KR1 87 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 SMIM21Q3B7S5 101 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 GFI1BQ5VTD9 330 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 VKORC1L1Q8N0U8 176 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 CD177Q8N6Q3 437 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 OR10P1Q8NGE3 313 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 SMIM7Q9BQ49 75 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
ARHGEF40-203ENST00000554514 IFNA1P01562 189 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 EGR1P18146 543 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 C1QL4Q86Z23 238 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 OR5T1Q8NG75 326 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 OR10G7Q8NGN6 311 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 FAM210BQ96KR6 192 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 GNG12Q9UBI6 72 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 IGHG3P01860 377 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 TUBG1P23258 451 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 IGHV1-18A0A0C4DH31 117 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 SMCO3A2RU48 225 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BKO60814 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 FCGR3BO75015 233 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BJP06899 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BOP23527 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BBP33778 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 ZNF83P51522 516 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BDP58876 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BCP62807 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST2H2BEQ16778 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 NCR3LG1Q68D85 454 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BHQ93079 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BNQ99877 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 HIST1H2BMQ99879 126 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 SDF2L1Q9HCN8 221 aa13.09□□□□□ -0.31
ARHGEF40-203ENST00000554514 MARCH11A6NNE9 402 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 EDDM3BP56851 147 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 CD81P60033 236 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 SPRNQ5BIV9 151 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 TOLLIPQ9H0E2 274 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 SPINT2O43291 252 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 PRDX2P32119 198 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 GPR12P47775 334 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 WDR25Q64LD2 544 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR4F5Q8NH21 305 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 LEAP2Q969E1 77 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR4F4Q96R69 305 aa13.08□□□□□ -0.32
ARHGEF40-203ENST00000554514 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 IFITM10A6NMD0 228 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 CLDN34H7C241 214 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 CLDN14O95500 239 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 CYB5R3P00387 301 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 NKX6-1P78426 367 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 S100A12P80511 92 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 EIF4EBP1Q13541 118 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 SARAFQ96BY9 339 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 MGAQ8IWI9 3026 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 COX5AP20674 150 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 HOXA5P20719 270 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 MEF2BQ02080 365 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 RPL39P5Q59GN2 51 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 FAM201AQ5SY85 155 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms