RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 A3GALT2U3KPV4 340 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 DNAH9Q9NYC9 4486 aa5.14□□□□□ -1.59
SLIRP-203ENST00000554074 A0A075B6Q4 140 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 A0A0A6YYD4 124 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 G3V318 75 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 H0YJW9 148 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 RRHO14718 337 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ARPC1BO15143 372 aaKnown RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ST8SIA5O15466 376 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 SPDEFO95238 335 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 APOA1P02647 267 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 GSTP1P09211 210 aaKnown RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 CT45A6P0DMU7 189 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 CT45A5P0DMU8 189 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 CT45A7P0DMV0 189 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 CNTFRP26992 372 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 NCS1P62166 190 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 LSM3P62310 102 aaKnown RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 HLA-DRB3P79483 266 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 MRPS15P82914 257 aaKnown RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 MXD1Q05195 221 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 TMEM267Q0VDI3 215 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF260Q3ZCT1 412 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 UBE2NLQ5JXB2 153 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ASPHD1Q5U4P2 390 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 FAM131AQ6UXB0 335 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 C5orf24Q7Z6I8 188 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF429Q86V71 674 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 OR10R2Q8NGX6 335 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 IL1F10Q8WWZ1 152 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 RAB3CQ96E17 227 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 S100A16Q96FQ6 103 aaKnown RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 TOLLIPQ9H0E2 274 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 KLK15Q9H2R5 256 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 RNF167Q9H6Y7 350 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 GNB4Q9HAV0 340 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 CHMP1AQ9HD42 196 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 Q9N2K0 584 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 C12orf4Q9NQ89 552 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 PARP11Q9NR21 331 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 BATF3Q9NR55 127 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 RHBDL2Q9NX52 303 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 RSL24D1Q9UHA3 163 aaKnown RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 AK3Q9UIJ7 227 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ADAM30Q9UKF2 790 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 RNF150Q9ULK6 438 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 FOXA2Q9Y261 457 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF256Q9Y2P7 627 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-203ENST00000554074 WASHC3Q9Y3C0 194 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 NUBP2Q9Y5Y2 271 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 WSB1Q9Y6I7 421 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 CEPT1Q9Y6K0 416 aa5.13□□□□□ -1.59
SLIRP-203ENST00000554074 A0A1W2PN81 502 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 H3BMQ9 156 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 RAB27BO00194 218 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 OVOL1O14753 267 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 SOCS1O15524 211 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 XRCC3O43542 346 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 SOX15O60248 233 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 LGALS1P09382 135 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 CLEC2LP0C7M8 214 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 SNRPBP14678 240 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 HIST1H1DP16402 221 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 DTYMKP23919 212 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 CHRNA7P36544 502 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 ECI1P42126 302 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 CBX5P45973 191 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 VEGFCP49767 419 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 CLDN12P56749 244 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 GNB1P62873 340 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 CX3CL1P78423 397 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 NDPQ00604 133 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 AKIRIN2Q53H80 203 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 RPL39P5Q59GN2 51 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF562Q6V9R5 426 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 Q6ZS49 121 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 PDPNQ86YL7 162 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 LGALS14Q8TCE9 139 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 DYNC2LI1Q8TCX1 351 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 RBMXL1Q96E39 390 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 ABHD14BQ96IU4 210 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 PRR25Q96S07 402 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 TSNAXQ99598 290 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 PECRQ9BY49 303 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 NAA50Q9GZZ1 169 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 C11orf54Q9H0W9 315 aaPredicted RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 RBM38Q9H0Z9 239 aaKnown RBP5.12□□□□□ -1.59
SLIRP-203ENST00000554074 ATG5Q9H1Y0 275 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 KCNK15Q9H427 330 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 FBXL15Q9H469 300 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 SLA2Q9H6Q3 261 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 TPSG1Q9NRR2 321 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 GAB2Q9UQC2 676 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 U3KQK5 164 aa5.12□□□□□ -1.59
SLIRP-203ENST00000554074 CCDC160A6NGH7 325 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 TRDCB7Z8K6 153 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 LINC01619G3V211 115 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 H3BUA1 57 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 H7C2Y5 167 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms