RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 A0A0A6YYH2 397 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 SMIM31A0A1B0GVY4 71 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 TMEM235A6NFC5 223 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 A6NJ64 397 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 M0R1X1 148 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 NBR2O15453 112 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 RBBP9O75884 186 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 OR5H8P0DN80 308 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 DTYMKP23919 212 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 CD40LGP29965 261 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 MECP2P51608 486 aaKnown RBP4.67□□□□□ -1.66
CCDC65-204ENST00000552188 LUMP51884 338 aaPredicted RBP4.67□□□□□ -1.66
CCDC65-204ENST00000552188 F2RL1P55085 397 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 CD83Q01151 205 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 SRSF7Q16629 238 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCDC65-204ENST00000552188 RTL8BQ17RB0 113 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
CCDC65-204ENST00000552188 HACD4Q5VWC8 232 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 LIN54Q6MZP7 749 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 TEX38Q6PEX7 206 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 TMEM65Q6PI78 240 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 NR2C2APQ86WQ0 139 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 STPG2Q8N412 459 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 COMMD1Q8N668 190 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 Q8N6K4 173 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 RNF152Q8N8N0 203 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 Q8N9W7 124 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.67□□□□□ -1.66
CCDC65-204ENST00000552188 OR5H6Q8NGV6 325 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 NUDCD2Q8WVJ2 157 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 YIPF6Q96EC8 236 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 TSNAXQ99598 290 aaKnown RBP4.67□□□□□ -1.66
CCDC65-204ENST00000552188 DCUN1D5Q9BTE7 237 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 IFT46Q9NQC8 304 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 PARP11Q9NR21 331 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 SLC35D1Q9NTN3 355 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 ZFP57Q9NU63 452 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 SPATA2Q9UM82 520 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 KCNK7Q9Y2U2 307 aa4.67□□□□□ -1.66
CCDC65-204ENST00000552188 TRBV6-7A0A0A0MS04 114 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 IGKV1-6A0A0C4DH72 117 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 H0YJW9 148 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 RRHO14718 337 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 SLC22A5O76082 557 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CNIH1O95406 144 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 DIRAS3O95661 229 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CT45A6P0DMU7 189 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CT45A5P0DMU8 189 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CT45A7P0DMV0 189 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 RRASP10301 218 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CNTFRP26992 372 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 RPS19P39019 145 aaKnown RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CBX5P45973 191 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 THBS3P49746 956 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 VBP1P61758 197 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 VAMP2P63027 116 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 DEFA6Q01524 100 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 TMEM267Q0VDI3 215 aaPredicted RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 C5orf64Q2M2E5 130 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 ZNF260Q3ZCT1 412 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 ANKRD39Q53RE8 183 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 UBE2NLQ5JXB2 153 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CNIH2Q6PI25 160 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 C10orf99Q6UWK7 81 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 Q6ZPA2 131 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 PDPNQ86YL7 162 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 SAMD12Q8N8I0 201 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 DRAXINQ8NBI3 349 aaPredicted RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 KLHL30-AS1Q8NEE0 82 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 BEST4Q8NFU0 473 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 FLYWCH2Q96CP2 140 aaKnown RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 ADTRPQ96IZ2 230 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CLCC1Q96S66 551 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 RNF5Q99942 180 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 CABLES2Q9BTV7 478 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 FUNDC2Q9BWH2 189 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 MRPS26Q9BYN8 205 aaKnown RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 PARP12Q9H0J9 701 aaKnown RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 FBXL15Q9H469 300 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 PLSCR3Q9NRY6 295 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 COMMD3Q9UBI1 195 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 METTL1Q9UBP6 276 aaKnown RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 ANXA10Q9UJ72 324 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 ELF5Q9UKW6 265 aaPredicted RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 MRPS7Q9Y2R9 242 aaKnown RBP4.66□□□□□ -1.66
CCDC65-204ENST00000552188 WSB1Q9Y6I7 421 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 A3GALT2U3KPV4 340 aa4.66□□□□□ -1.66
CCDC65-204ENST00000552188 TRAV41A0A0B4J266 112 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 MEIS3P1A6NDR6 274 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 LINC01548A6NM66 108 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 FAM25AB3EWG3 89 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 FAM25CB3EWG5 89 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 FAM25GB3EWG6 89 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 XRCC3O43542 346 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 NOL3O60936 208 aaKnown RBP4.65□□□□□ -1.67
CCDC65-204ENST00000552188 HLA-DRB1P01911 266 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 FCER2P06734 321 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 ELANEP08246 267 aa4.65□□□□□ -1.67
CCDC65-204ENST00000552188 NFYAP23511 347 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms