RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PMP2P02689 132 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 RRASP10301 218 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 HLA-DMAP28067 261 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 LGALS7P47929 136 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 RFX2P48378 723 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 THBS3P49746 956 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 LINC00205P59089 165 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 TSPAN5P62079 268 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 RPS16P62249 146 aaKnown RBP8.43□□□□□ -1.06
PTCH1-225ENST00000551845 SRSF4Q08170 494 aaKnown RBP8.43□□□□□ -1.06
PTCH1-225ENST00000551845 CBX3Q13185 183 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 LIN54Q6MZP7 749 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 FAM131AQ6UXB0 335 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 PDPNQ86YL7 162 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 KLHDC1Q8N7A1 406 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 ZNF645Q8N7E2 425 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 ZBTB34Q8NCN2 500 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 NPBQ8NG41 125 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 OR6F1Q8NGZ6 308 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 SNAPC3Q92966 411 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 ABHD1Q96SE0 405 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 CITED1Q99966 193 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 MMP27Q9H306 513 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 SLC35D1Q9NTN3 355 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 ANAPC10Q9UM13 185 aa8.43□□□□□ -1.06
PTCH1-225ENST00000551845 IGHG2P01859 326 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 AADACP22760 399 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 DUTP33316 252 aaKnown RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 S100A5P33763 92 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 RCVRNP35243 200 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 KRTAP10-3P60369 221 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 MRPS10P82664 201 aaKnown RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 DYRK1AQ13627 763 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 IL18Q14116 193 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 PYHIN1Q6K0P9 492 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 SLC35E3Q7Z769 313 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 FOXRED2Q8IWF2 684 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 LAX1Q8IWV1 398 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 OR5AU1Q8NGC0 362 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 RBMXL1Q96E39 390 aaKnown RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 ZNF2Q9BSG1 426 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 DCUN1D5Q9BTE7 237 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 GON7Q9BXV9 100 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 WNT10AQ9GZT5 417 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 SLC5A7Q9GZV3 580 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 NXF2Q9GZY0 626 aaKnown RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 RBM38Q9H0Z9 239 aaKnown RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 CCL28Q9NRJ3 127 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 KLK11Q9UBX7 282 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 RBMX2Q9Y388 322 aaKnown RBP8.42□□□□□ -1.06
PTCH1-225ENST00000551845 PRELID3BQ9Y3B1 194 aa8.42□□□□□ -1.06
PTCH1-225ENST00000551845 IGKV1D-13A0A0B4J2D9 117 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 FABP12A6NFH5 140 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 GABARAPH6UMI1 98 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 IFNA6P05013 189 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 IGKV1-13P0DP09 117 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 TNFSF8P32971 234 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 HRH1P35367 487 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 FXYD4P59646 89 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 HERV-K104P61576 105 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 PLGLAQ15195 96 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 MSMO1Q15800 293 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 RTL8BQ17RB0 113 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 C5orf64Q2M2E5 130 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 ACTBL2Q562R1 376 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 LPCAT3Q6P1A2 487 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 ZNF66Q6ZN08 573 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 MFSD4AQ8N468 514 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 FAM71E2Q8N5Q1 922 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 BVESQ8NE79 360 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 OR52I2Q8NH67 350 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 CHPT1Q8WUD6 406 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 SECTM1Q8WVN6 248 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 BORCS5Q969J3 196 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 TSNAXQ99598 290 aaKnown RBP8.41□□□□□ -1.06
PTCH1-225ENST00000551845 HSD17B10Q99714 261 aaKnown RBP8.41□□□□□ -1.06
PTCH1-225ENST00000551845 MTFP1Q9UDX5 166 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 A3GALT2U3KPV4 340 aa8.41□□□□□ -1.06
PTCH1-225ENST00000551845 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 DPPA5A6NC42 116 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 LINC01548A6NM66 108 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 AP4M1O00189 453 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 RRHO14718 337 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 CTDSPLO15194 276 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 SHOXO15266 292 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 NDUFA3O95167 84 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 IGLV2-14P01704 120 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 IGKV1-16P04430 117 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 CNTFRP26992 372 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 SLC35B1P78383 322 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 SSBP1Q04837 148 aaKnown RBP8.4□□□□□ -1.06
PTCH1-225ENST00000551845 PSG5Q15238 335 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 TMEM95Q3KNT9 176 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 RNASE12Q5GAN4 147 aaKnown RBP8.4□□□□□ -1.06
PTCH1-225ENST00000551845 TMEM17Q86X19 198 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 C5orf30Q96GV9 206 aa8.4□□□□□ -1.06
PTCH1-225ENST00000551845 ZNF107Q9UII5 783 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-225ENST00000551845 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms