RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 NCS1P62166 190 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 CX3CL1P78423 397 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 GVQW1Q8N7I0 195 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 ABHD5Q8WTS1 349 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 FLYWCH2Q96CP2 140 aaKnown RBP13.08□□□□□ -0.32
BRF1-219ENST00000551787 FUNDC2Q9BWH2 189 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 SPATA2Q9UM82 520 aa13.08□□□□□ -0.32
BRF1-219ENST00000551787 TRAV41A0A0B4J266 112 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 DIRAS3O95661 229 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 ELANEP08246 267 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 OR5H8P0DN80 308 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 THBS3P49746 956 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 ECSCRQ19T08 205 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 KPRPQ5T749 579 aaPredicted RBP13.07□□□□□ -0.32
BRF1-219ENST00000551787 LINC00482Q8N8I6 264 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 RNF152Q8N8N0 203 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 BVESQ8NE79 360 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 CASTOR1Q8WTX7 329 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 TSNAXQ99598 290 aaKnown RBP13.07□□□□□ -0.32
BRF1-219ENST00000551787 RNF5Q99942 180 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 FAM103A1Q9BTL3 118 aaKnown RBP13.07□□□□□ -0.32
BRF1-219ENST00000551787 AUNIPQ9H7T9 357 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 DIABLOQ9NR28 239 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 ANXA10Q9UJ72 324 aa13.07□□□□□ -0.32
BRF1-219ENST00000551787 TGP01266 2768 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 MEIS3P1A6NDR6 274 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 SLC25A17O43808 307 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 CTXN2P0C2S0 81 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 SMIM18P0DKX4 95 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 EGR2P11161 476 aaPredicted RBP13.06□□□□□ -0.32
BRF1-219ENST00000551787 PSMB8P28062 276 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 PPIFP30405 207 aaKnown RBP13.06□□□□□ -0.32
BRF1-219ENST00000551787 RAB25P57735 213 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 VBP1P61758 197 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 ZNF660Q6AZW8 331 aaPredicted RBP13.06□□□□□ -0.32
BRF1-219ENST00000551787 CNIH2Q6PI25 160 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 TMEM65Q6PI78 240 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 PDPNQ86YL7 162 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 CROCCP3Q8IVE0 287 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 SAMD12Q8N8I0 201 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 RAX2Q96IS3 184 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 OR2W1Q9Y3N9 320 aa13.06□□□□□ -0.32
BRF1-219ENST00000551787 IGKV1D-13A0A0B4J2D9 117 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 CCL24O00175 119 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 CA2P00918 260 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 IGKV1-13P0DP09 117 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 MYCNOSP40205 109 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
BRF1-219ENST00000551787 LUMP51884 338 aaPredicted RBP13.05□□□□□ -0.32
BRF1-219ENST00000551787 PJVKQ0ZLH3 352 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 FOXB2Q5VYV0 432 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 PPP1R27Q86WC6 154 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 S100A16Q96FQ6 103 aaKnown RBP13.05□□□□□ -0.32
BRF1-219ENST00000551787 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
BRF1-219ENST00000551787 A0A0A6YYH2 397 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 A6NJ64 397 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 SRRM4A7MD48 611 aaKnown RBP13.04□□□□□ -0.32
BRF1-219ENST00000551787 LINC00473A8K010 186 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 SHOXO15266 292 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 TUSC2O75896 110 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 IGLV2-23P01705 113 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 DUTP33316 252 aaKnown RBP13.04□□□□□ -0.32
BRF1-219ENST00000551787 GNB1P62873 340 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
BRF1-219ENST00000551787 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 BEST4Q8NFU0 473 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 SLC25A46Q96AG3 418 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 HARBI1Q96MB7 349 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 P2RX4Q99571 388 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 NAA50Q9GZZ1 169 aaKnown RBP13.04□□□□□ -0.32
BRF1-219ENST00000551787 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 COMMD3Q9UBI1 195 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 NUBP2Q9Y5Y2 271 aa13.04□□□□□ -0.32
BRF1-219ENST00000551787 A0A1W2PN81 502 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 XRCC3O43542 346 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 SOX15O60248 233 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 CNIH1O95406 144 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 CRYZL1O95825 349 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 SLC6A1P30531 599 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 CHRNA7P36544 502 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 RAB9AP51151 201 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 ARPC4P59998 168 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 FXYD3Q14802 87 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 OR2B11Q5JQS5 317 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 UBE2NLQ5JXB2 153 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 UNQ5815/PRO19632Q6UWF5 114 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 ZNF562Q6V9R5 426 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 HOGA1Q86XE5 327 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 LFNGQ8NES3 379 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 RCC1LQ96I51 464 aaKnown RBP13.03□□□□□ -0.32
BRF1-219ENST00000551787 GPHA2Q96T91 129 aa13.03□□□□□ -0.32
BRF1-219ENST00000551787 ARPC1BO15143 372 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms