RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IGLV1-51P01701 117 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 CD7P09564 240 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 OR8U9P0C7N5 309 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 DCKP27707 260 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 CAPGP40121 348 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 CEACAM6P40199 344 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 INSL3P51460 131 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 EWSR1Q01844 656 aaKnown RBP eCLIP5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 FXYD3Q14802 87 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 HMGN3Q15651 99 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 CCDC58Q4VC31 144 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 AHSA2Q719I0 299 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 LINC00596Q86U02 117 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 LRRTM1Q86UE6 522 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 PQLC1Q8N2U9 271 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 OR6Q1Q8NGQ2 317 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 TMEM203Q969S6 136 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 ISOC1Q96CN7 298 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 CPNE2Q96FN4 548 aaPredicted RBP5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 TMEM80Q96HE8 168 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 NEDD4LQ96PU5 975 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 YPEL2Q96QA6 119 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 GFI1Q99684 422 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 C9orf16Q9BUW7 83 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 TUBA4BQ9H853 241 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 PAK1IP1Q9NWT1 392 aaPredicted RBP5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 CKLFQ9UBR5 152 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 JPT1Q9UK76 154 aa5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 DIMT1Q9UNQ2 313 aaKnown RBP5.19□□□□□ -1.58
PRPF40B-214ENST00000551320 RBMY1BA6NDE4 496 aaKnown RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 RBMY1EA6NEQ0 496 aaKnown RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 PPP5D1E7EU14 171 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 M0R1X1 148 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF780AO75290 641 aaPredicted RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 GPX5O75715 221 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 RGS11O94810 467 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 CNIH1O95406 144 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 IGLV2-23P01705 113 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 CSN3P07498 182 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 RBMY1DP0C7P1 496 aaKnown RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 MYOD1P15172 320 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 MYL12AP19105 171 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 RASSF2P50749 326 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 HTD2P86397 168 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 KLF5Q13887 457 aaPredicted RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 MRGPRG-AS1Q2M3A8 158 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 Q3ZCU0 254 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ACSM3Q53FZ2 586 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 YIF1BQ5BJH7 314 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 RBM48Q5RL73 367 aaKnown RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 C10orf55Q5SWW7 151 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF660Q6AZW8 331 aaPredicted RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 SYT8Q8NBV8 401 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF555Q8NEP9 628 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 BPIFB6Q8NFQ5 453 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 CACNG8Q8WXS5 425 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 AGMATQ9BSE5 352 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 THAP7Q9BT49 309 aaPredicted RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 CST11Q9H112 138 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 GHITMQ9H3K2 345 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 SPACA1Q9HBV2 294 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ZC4H2Q9NQZ6 224 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 COA4Q9NYJ1 87 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF230Q9UIE0 474 aaPredicted RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 ELF5Q9UKW6 265 aaPredicted RBP5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 WASHC3Q9Y3C0 194 aa5.18□□□□□ -1.58
PRPF40B-214ENST00000551320 A0A075B6Q4 140 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 A0A0B4J203 849 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 C13orf42A0A1B0GVH6 325 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 RAB27BO00194 218 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 RAB29O14966 203 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 BET1O15155 118 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 HSPA12AO43301 675 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 NAPSAO96009 420 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 VEGFCP49767 419 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 TMEM50BP56557 158 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 RPS27AP62979 156 aaKnown RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 QRFPP83859 136 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 MRPL28Q13084 256 aaKnown RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 PMS2P11Q13670 270 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 GPR176Q14439 515 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 ODF1Q14990 250 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 CD300EQ496F6 205 aaPredicted RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 IGSF11Q5DX21 431 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 OR2B11Q5JQS5 317 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF880Q6PDB4 577 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 CD200R1LQ6Q8B3 271 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 SGPP2Q8IWX5 399 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 POC5Q8NA72 575 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 OR9G4Q8NGQ1 327 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 FLYWCH2Q96CP2 140 aaKnown RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 ARHGAP5-AS1Q96IT6 56 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 GPHA2Q96T91 129 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 TMEM59Q9BXS4 323 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 HIPK2Q9H2X6 1198 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 PLEKHJ1Q9NW61 149 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 SMPD3Q9NY59 655 aaPredicted RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 RDH8Q9NYR8 311 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 ABRACLQ9P1F3 81 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 STEAP1Q9UHE8 339 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms