RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ATP6V1G2O95670 118 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 RPS16P62249 146 aaKnown RBP12.29□□□□□ -0.44
COX6A1-203ENST00000550009 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
COX6A1-203ENST00000550009 UNQ5815/PRO19632Q6UWF5 114 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 OR10R2Q8NGX6 335 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 GPR61Q9BZJ8 451 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 TOLLIPQ9H0E2 274 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 OR2D2Q9H210 308 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 SDHAF2Q9NX18 166 aa12.29□□□□□ -0.44
COX6A1-203ENST00000550009 FOXA2Q9Y261 457 aaPredicted RBP12.29□□□□□ -0.44
COX6A1-203ENST00000550009 TRDV1A0A1B0GX56 115 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 APELAP0DMC3 54 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 OR5H8P0DN80 308 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 RAB3BP20337 219 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 RUNX1Q01196 453 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 SPARTQ8N0X7 666 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 GRPEL2Q8TAA5 225 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 EDARADDQ8WWZ3 215 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 CABLES2Q9BTV7 478 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 SLC35D1Q9NTN3 355 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
COX6A1-203ENST00000550009 TENM3Q9P273 2699 aa12.27□□□□□ -0.44
COX6A1-203ENST00000550009 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
COX6A1-203ENST00000550009 TFAP2AP05549 437 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 CRYGBP07316 175 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 HIST1H1DP16402 221 aaKnown RBP12.27□□□□□ -0.45
COX6A1-203ENST00000550009 MC5RP33032 325 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 ACTBL2Q562R1 376 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 OR5T1Q8NG75 326 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 CHCHD6Q9BRQ6 235 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 TXNL4BQ9NX01 149 aaKnown RBP12.27□□□□□ -0.45
COX6A1-203ENST00000550009 ADAM30Q9UKF2 790 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 RAB26Q9ULW5 256 aa12.27□□□□□ -0.45
COX6A1-203ENST00000550009 LINC00473A8K010 186 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 OVOL1O14753 267 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 MYL9P24844 172 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 PSMB9P28065 219 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 FXYD3Q14802 87 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 UBE2UQ5VVX9 321 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 BVESQ8NE79 360 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 ATG5Q9H1Y0 275 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 OR51E2Q9H255 320 aa12.26□□□□□ -0.45
COX6A1-203ENST00000550009 PDCD5O14737 125 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 LY86O95711 162 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 LGALS1P09382 135 aaKnown RBP12.25□□□□□ -0.45
COX6A1-203ENST00000550009 HSPA13P48723 471 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 TPPP2P59282 170 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
COX6A1-203ENST00000550009 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 IDO2Q6ZQW0 420 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 PDPNQ86YL7 162 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 VCX3BQ9H321 246 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
COX6A1-203ENST00000550009 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
COX6A1-203ENST00000550009 LINC01619G3V211 115 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 RAMP3O60896 148 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 RBBP9O75884 186 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 PTHLHP12272 177 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 SPNP16150 400 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 RAB6AP20340 208 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 GABARAPL2P60520 117 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 ARFRP1Q13795 201 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 CDNFQ49AH0 187 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 H1FOOQ8IZA3 346 aaPredicted RBP12.24□□□□□ -0.45
COX6A1-203ENST00000550009 DDB2Q92466 427 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 FLYWCH2Q96CP2 140 aaKnown RBP12.24□□□□□ -0.45
COX6A1-203ENST00000550009 RHOVQ96L33 236 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 GPHA2Q96T91 129 aa12.24□□□□□ -0.45
COX6A1-203ENST00000550009 IGKV1D-13A0A0B4J2D9 117 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 SSX5O60225 188 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 SAP30O75446 220 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 TRBV12-3P01733 135 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 APOA2P02652 100 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 TRGV3P03979 118 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 IGKV1-13P0DP09 117 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
COX6A1-203ENST00000550009 TGFBR1P36897 503 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 PSMD7P51665 324 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 AKIRIN2Q53H80 203 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 OVCH2Q7RTZ1 564 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 OR5H6Q8NGV6 325 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
COX6A1-203ENST00000550009 RNF5Q99942 180 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 ST6GALNAC5Q9BVH7 336 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 DAPK2Q9UIK4 370 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 BLOC1S6Q9UL45 172 aa12.23□□□□□ -0.45
COX6A1-203ENST00000550009 SACSQ9NZJ4 4579 aa12.22□□□□□ -0.45
COX6A1-203ENST00000550009 DYNC2H1Q8NCM8 4307 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms