RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 OR51B4Q9Y5P0 310 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CEP170Q5SW79 1584 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 FLT4P35916 1363 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 ZFYVE9O95405 1425 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 A0A1B0GV50 99 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 LINC00862A6NCI5 91 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 A6NED7 52 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CLDN24A6NM45 220 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 M0R381 172 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 FADS1O60427 444 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 OPN1SWP03999 348 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CTLA4P16410 223 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 ATP6V0CP27449 155 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CRABP2P29373 138 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CA7P43166 264 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CAPZBP47756 277 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 DAPP51397 102 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 TMEM33P57088 247 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 OR4D2P58180 307 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 SPCS3P61009 180 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 RBX1P62877 108 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 BTN3A2P78410 334 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 BSPH1Q075Z2 132 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 OR8G1Q15617 311 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 PLPPR5Q32ZL2 321 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 PYCR3Q53H96 274 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 C1orf194Q5T5A4 169 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 HIST2H3PS2Q5TEC6 136 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 SBSNQ6UWP8 590 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 TMEM86BQ8N661 226 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 ZFAND2AQ8N6M9 145 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CLDN22Q8N7P3 220 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 LY6G5BQ8NDX9 201 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 HIST1H2BAQ96A08 127 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 DIRAS2Q96HU8 199 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 OR52B2Q96RD2 323 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 OR52E6Q96RD3 313 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 TBX5Q99593 518 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 TMEM109Q9BVC6 243 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 C1QTNF6Q9BXI9 259 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 PECRQ9BY49 303 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 TLNRD1Q9H1K6 362 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 CENPHQ9H3R5 247 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 SLC23A2Q9UGH3 650 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 WASHC3Q9Y3C0 194 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 SAMHD1Q9Y3Z3 626 aaKnown RBP1.57□□□□□ -2.16
CCDC38-208ENST00000549876 THSD7AQ9UPZ6 1657 aa1.57□□□□□ -2.16
CCDC38-208ENST00000549876 SCN4AP35499 1836 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 ADGRL1O94910 1474 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 TGIF2-C20orf24A0A0A6YYL0 155 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 A0A0B4J2C4 111 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 SMIM9A6NGZ8 99 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 E5RI56 91 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 LECT2O14960 151 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 EEF1E1O43324 174 aaKnown RBP1.56□□□□□ -2.16
CCDC38-208ENST00000549876 GSTZ1O43708 216 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-208ENST00000549876 CHP2O43745 196 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 ZNF189O75820 626 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-208ENST00000549876 APOMO95445 188 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 INAFM2P0DMQ5 153 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 IGHV3-30-3P0DP02 117 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 HOXC5Q00444 222 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 IFITM2Q01629 132 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 PRDX4Q13162 271 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 EDDM3AQ14507 147 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 SNCBQ16143 134 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 GUK1Q16774 197 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 FAM201AQ5SY85 155 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 C5orf46Q6UWT4 87 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 TMEM136Q6ZRR5 245 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 HIST2H3AQ71DI3 136 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 DEFB125Q8N687 156 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 OR2D3Q8NGH3 330 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 OR1L8Q8NGR8 309 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 SELENOSQ9BQE4 189 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 NKX6-2Q9C056 277 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-208ENST00000549876 TAS2R1Q9NYW7 299 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 OR5V1Q9UGF6 321 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 ZNF391Q9UJN7 358 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 STOML2Q9UJZ1 356 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 HHLA2Q9UM44 414 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 PRELID1Q9Y255 219 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 ARL2BPQ9Y2Y0 163 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 U3KQK5 164 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 NCOA1Q15788 1441 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 MUC6Q6W4X9 2439 aa1.56□□□□□ -2.16
CCDC38-208ENST00000549876 KMT2EQ8IZD2 1858 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 IGKV1D-37A0A075B6S9 117 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 TMED7-TICAM2A0A0A6YYA0 188 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 SLC25A20O43772 301 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 HAND1O96004 215 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 FAM228BP0C875 321 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 CD79AP11912 226 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 PRPS1L1P21108 318 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 CCL1P22362 96 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 PPP1CCP36873 323 aaKnown RBP1.55□□□□□ -2.16
CCDC38-208ENST00000549876 PPP1R2P41236 205 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 MAP2K4P45985 399 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 CDK9P50750 372 aaKnown RBP1.55□□□□□ -2.16
CCDC38-208ENST00000549876 KLF3P57682 345 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms