RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 KIR2DS2P43631 304 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 LGALS7P47929 136 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 ZIK1Q3SY52 487 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-208ENST00000546534 LGALS9CQ6DKI2 356 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 SLC16A13Q7RTY0 426 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 LYG2Q86SG7 212 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 ZNF383Q8NA42 475 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 CENPNQ96H22 339 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-208ENST00000546534 TMEM68Q96MH6 324 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 SULT4A1Q9BR01 284 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 GGTLC1Q9BX51 225 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 DNAH10Q8IVF4 4471 aa9.54□□□□□ -0.88
SCAF11-208ENST00000546534 TRBV5-5A0A0J9YX44 114 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 IGLV2-23P01705 113 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 ALPLP05186 524 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 APELAP0DMC3 54 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 FCGR1AP12314 374 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 FOLR2P14207 255 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 TNFRSF9Q07011 255 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 FAAP24Q9BTP7 215 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 C11orf54Q9H0W9 315 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-208ENST00000546534 CKLFQ9UBR5 152 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 SELENOKQ9Y6D0 94 aa9.53□□□□□ -0.88
SCAF11-208ENST00000546534 LOC102724200A0A096LPH7 203 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-208ENST00000546534 C2orf70A6NJV1 201 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 ITGB1BP1O14713 200 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 OGG1O15527 345 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 NDUFB8O95169 186 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 CRYGBP07316 175 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 EXOSC2Q13868 293 aaKnown RBP9.52□□□□□ -0.89
SCAF11-208ENST00000546534 OR2G6Q5TZ20 316 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 PDPNQ86YL7 162 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 ADAD2Q8NCV1 583 aaKnown RBP9.52□□□□□ -0.89
SCAF11-208ENST00000546534 FAM46BQ96A09 425 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 NEDD4LQ96PU5 975 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 AKIP1Q9NQ31 210 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 TECRQ9NZ01 308 aaKnown RBP9.52□□□□□ -0.89
SCAF11-208ENST00000546534 OR1A1Q9P1Q5 309 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 ORC6Q9Y5N6 252 aa9.52□□□□□ -0.89
SCAF11-208ENST00000546534 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 A0A1W2PPK0 400 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 MSGN1A6NI15 193 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 APOA2P02652 100 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 CAPGP40121 348 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 CEACAM6P40199 344 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 ETV1P50549 477 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 RPS11P62280 158 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCAF11-208ENST00000546534 RHOGP84095 191 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 Q499Y3 187 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 ZNF880Q6PDB4 577 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 C6orf201Q7Z4U5 140 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 CDH26Q8IXH8 852 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 RHOXF1Q8NHV9 184 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 KCNG3Q8TAE7 436 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 SETD6Q8TBK2 473 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 SMIM19Q96E16 107 aa9.51□□□□□ -0.89
SCAF11-208ENST00000546534 MRPS18AQ9NVS2 196 aaKnown RBP9.51□□□□□ -0.89
SCAF11-208ENST00000546534 ZNF230Q9UIE0 474 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-208ENST00000546534 TRBV5-7A0A0A0MS05 114 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 FAM223BA6NKX1 122 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 EI24O14681 340 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 ATP8B1O43520 1251 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 SPRY2O43597 315 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 NAPSAO96009 420 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 LALBAP00709 142 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 PRH1P02810 166 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 OR9G9P0C7N8 305 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 BMI1P35226 326 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 ATP5G2Q06055 141 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 FAM223AQ8IWN6 122 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 TMEM61Q8N0U2 210 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 OR52B4Q8NGK2 314 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 Q96MT0 163 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 PHB2Q99623 299 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 CHMP1AQ9HD42 196 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-208ENST00000546534 SLC35D1Q9NTN3 355 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 BABAM2Q9NXR7 383 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 ZNF221Q9UK13 617 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 TP53TG1Q9Y2A0 90 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 DMRT1Q9Y5R6 373 aa9.5□□□□□ -0.89
SCAF11-208ENST00000546534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.49□□□□□ -0.89
SCAF11-208ENST00000546534 TRBV9A0A0B4J1U6 114 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 M0R1X1 148 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 HLA-AP01891 365 aaKnown RBP9.49□□□□□ -0.89
SCAF11-208ENST00000546534 ATF4P18848 351 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-208ENST00000546534 ZBTB25P24278 435 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 ADMP35318 185 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 ZNF45Q02386 682 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 OR10K2Q6IF99 312 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 TMPRSS11AQ6ZMR5 421 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 PHLDA1Q8WV24 401 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-208ENST00000546534 CACNG8Q8WXS5 425 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 THRSPQ92748 146 aa9.49□□□□□ -0.89
SCAF11-208ENST00000546534 FGF20Q9NP95 211 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-208ENST00000546534 RPL36Q9Y3U8 105 aaKnown RBP9.49□□□□□ -0.89
SCAF11-208ENST00000546534 SRRM4A7MD48 611 aaKnown RBP9.48□□□□□ -0.89
SCAF11-208ENST00000546534 PPP5D1E7EU14 171 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 TUSC2O75896 110 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms