RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 VDAC1P21796 283 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 CBX5P45973 191 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 THBS3P49746 956 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
YBX3-217ENST00000546164 FOXE3Q13461 319 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 SAMD12Q8N8I0 201 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 WFDC9Q8NEX5 89 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 BEST4Q8NFU0 473 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 ACOT12Q8WYK0 555 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 ADTRPQ96IZ2 230 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 TSNAXQ99598 290 aaKnown RBP9.32□□□□□ -0.92
YBX3-217ENST00000546164 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 SLC35D1Q9NTN3 355 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 RBM7Q9Y580 266 aaKnown RBP9.32□□□□□ -0.92
YBX3-217ENST00000546164 A0A1W2PRX2 142 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 ATP6V0E1O15342 81 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 SLC22A5O76082 557 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 APOA1P02647 267 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 RRASP10301 218 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 PF4V1P10720 104 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 PPIFP30405 207 aaKnown RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 DUTP33316 252 aaKnown RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 LGALS7P47929 136 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 LUMP51884 338 aaPredicted RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 CRIP2P52943 208 aaPredicted RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 NDPQ00604 133 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 PSG5Q15238 335 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 TMEM177Q53S58 311 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 ZNF660Q6AZW8 331 aaPredicted RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 ZNF645Q8N7E2 425 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 GVQW1Q8N7I0 195 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 DDB2Q92466 427 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 FLYWCH2Q96CP2 140 aaKnown RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 NAA50Q9GZZ1 169 aaKnown RBP9.31□□□□□ -0.92
YBX3-217ENST00000546164 ANAPC10Q9UM13 185 aa9.31□□□□□ -0.92
YBX3-217ENST00000546164 IGLV2-14P01704 120 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 NFYAP23511 347 aaPredicted RBP9.3□□□□□ -0.92
YBX3-217ENST00000546164 PSMB8P28062 276 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 RORCP51449 518 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 TAS2R20P59543 309 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 RPS16P62249 146 aaKnown RBP9.3□□□□□ -0.92
YBX3-217ENST00000546164 CX3CL1P78423 397 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 PRR20EP86478 221 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 PRR20CP86479 221 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 PRR20DP86480 221 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 PRR20BP86481 221 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 PRR20AP86496 221 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 MSMO1Q15800 293 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 RTL8BQ17RB0 113 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 CXorf66Q5JRM2 361 aaPredicted RBP9.3□□□□□ -0.92
YBX3-217ENST00000546164 TMEM69Q5SWH9 247 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 SAMD5Q5TGI4 173 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 GPR107Q5VW38 600 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 GPR141Q7Z602 305 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 SNAPC3Q92966 411 aa9.3□□□□□ -0.92
YBX3-217ENST00000546164 METTL1Q9UBP6 276 aaKnown RBP9.3□□□□□ -0.92
YBX3-217ENST00000546164 PLXNB1O43157 2135 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 TRAV41A0A0B4J266 112 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 IGKV1D-13A0A0B4J2D9 117 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 LINC00473A8K010 186 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 FCN1O00602 326 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 IGLV1-40P01703 118 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 IGLV2-23P01705 113 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
YBX3-217ENST00000546164 EIF4EP06730 217 aaKnown RBP9.29□□□□□ -0.92
YBX3-217ENST00000546164 CRYGBP07316 175 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 IGKV1-13P0DP09 117 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 PTHLHP12272 177 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
YBX3-217ENST00000546164 ARPC4P59998 168 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 CBX3Q13185 183 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 PLGLAQ15195 96 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 KPRPQ5T749 579 aaPredicted RBP9.29□□□□□ -0.92
YBX3-217ENST00000546164 ZNF562Q6V9R5 426 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 OVCH2Q7RTZ1 564 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 ZNF695Q8IW36 515 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 MINDY2Q8NBR6 621 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 AP3S1Q92572 193 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 PARP11Q9NR21 331 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 NECAP2Q9NVZ3 263 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 COMMD3Q9UBI1 195 aa9.29□□□□□ -0.92
YBX3-217ENST00000546164 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
YBX3-217ENST00000546164 G3V318 75 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 SLC25A17O43808 307 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 PF4P02776 101 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
YBX3-217ENST00000546164 ZNF182P17025 639 aaPredicted RBP9.28□□□□□ -0.92
YBX3-217ENST00000546164 NAT1P18440 290 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 FCGR2CP31995 323 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 DEFA6Q01524 100 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 EIF4EBP1Q13541 118 aaPredicted RBP9.28□□□□□ -0.92
YBX3-217ENST00000546164 BEAN1Q3B7T3 259 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 PPP1R27Q86WC6 154 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 BVESQ8NE79 360 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms