RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZNF702PQ9H963 129 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 PLSCR3Q9NRY6 295 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 MMP24Q9Y5R2 645 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 M0QZK8 103 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 FGF16O43320 207 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 CD74P04233 296 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 DUTP33316 252 aaKnown RBP16.3■□□□□ 0.2
HMGA2-211ENST00000545998 TAS2R19P59542 299 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 HERV-K104P61576 105 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 MSMO1Q15800 293 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 C11orf88Q6PI97 169 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 Q8N2B8 174 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 C5orf56Q8N8D9 126 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 LINC01006Q8NI28 216 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 BEX1Q9HBH7 125 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 WASHC3Q9Y3C0 194 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 CSF1P09603 554 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 THBS3P49746 956 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 F2RL1P55085 397 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 TSPAN5P62079 268 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 EIF4EBP1Q13541 118 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-211ENST00000545998 PYDC2Q56P42 97 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 RNASE10Q5GAN6 216 aaKnown RBP16.3■□□□□ 0.2
HMGA2-211ENST00000545998 Q6ZS46 218 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 OR8H1Q8NGG4 311 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 ADTRPQ96IZ2 230 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 PRSS22Q9GZN4 317 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 SLC5A7Q9GZV3 580 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 CCL28Q9NRJ3 127 aa16.3■□□□□ 0.2
HMGA2-211ENST00000545998 A0A1B0GUS0 222 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 NCBP2LA6PVI3 153 aaKnown RBP16.29■□□□□ 0.2
HMGA2-211ENST00000545998 LINC00473A8K010 186 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 APOA2P02652 100 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 IGKV1-16P04430 117 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 STEAP1BQ6NZ63 245 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 TMEM17Q86X19 198 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 Q8N9W7 124 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 OR4D10Q8NGI6 311 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 DDB2Q92466 427 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 FXYD6Q9H0Q3 95 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 TAS2R8Q9NYW2 309 aa16.29■□□□□ 0.2
HMGA2-211ENST00000545998 CLPSL1A2RUU4 121 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 H7C2Y5 167 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 TAGLNQ01995 201 aaKnown RBP16.28■□□□□ 0.2
HMGA2-211ENST00000545998 ABCA11PQ4W5N1 156 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 PDPNQ86YL7 162 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 Q8N402 240 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 THAP7Q9BT49 309 aaPredicted RBP16.28■□□□□ 0.2
HMGA2-211ENST00000545998 SLC35D1Q9NTN3 355 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 SIGLEC9Q9Y336 463 aa16.28■□□□□ 0.2
HMGA2-211ENST00000545998 ANKRD20A5PA0PJZ0 165 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 SH2D7A6NKC9 451 aaPredicted RBP16.27■□□□□ 0.2
HMGA2-211ENST00000545998 RAB3DO95716 219 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 IFNA6P05013 189 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 CNTFRP26992 372 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 GNRHRP30968 328 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 RPL30P62888 115 aaKnown RBP16.27■□□□□ 0.2
HMGA2-211ENST00000545998 AADACL3Q5VUY0 350 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 ZNF818PQ6ZRF7 136 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 ARRDC1Q8N5I2 433 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 FAM71E2Q8N5Q1 922 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 ZBTB34Q8NCN2 500 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 OR2T6Q8NHC8 308 aa16.27■□□□□ 0.2
HMGA2-211ENST00000545998 HSD17B10Q99714 261 aaKnown RBP16.27■□□□□ 0.2
HMGA2-211ENST00000545998 MMDQ15546 238 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 NPBQ8NG41 125 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 TRIM63Q969Q1 353 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 RNF5Q99942 180 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 SRRQ9GZT4 340 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 RNF114Q9Y508 228 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 AKAIN1P0CW23 69 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 MEF2DQ14814 521 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 C12orf54Q6X4T0 127 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 ZNF66Q6ZN08 573 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 KCTD9Q7L273 389 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 LHFPL1Q86WI0 220 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 BVESQ8NE79 360 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 GPHA2Q96T91 129 aa16.26■□□□□ 0.19
HMGA2-211ENST00000545998 NBR2O15453 112 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 PLXNB1O43157 2135 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 TNFSF12O43508 249 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 NDUFA3O95167 84 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 ZNF735P0CB33 412 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 RRASP10301 218 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 PROK1P58294 105 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 RTL8BQ17RB0 113 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 FAAP20Q6NZ36 180 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 MFSD4AQ8N468 514 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 OR4C16Q8NGL9 310 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 SPATA3Q8NHX4 192 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 BORCS5Q969J3 196 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 FLYWCH2Q96CP2 140 aaKnown RBP16.25■□□□□ 0.19
HMGA2-211ENST00000545998 SERTAD4Q9NUC0 356 aa16.25■□□□□ 0.19
HMGA2-211ENST00000545998 LIN7CQ9NUP9 197 aaKnown RBP16.25■□□□□ 0.19
HMGA2-211ENST00000545998 UCP3P55916 312 aa16.24■□□□□ 0.19
HMGA2-211ENST00000545998 LINC00299Q6ZSB3 139 aa16.24■□□□□ 0.19
HMGA2-211ENST00000545998 TCTEX1D2Q8WW35 142 aa16.24■□□□□ 0.19
HMGA2-211ENST00000545998 RASL11BQ9BPW5 248 aa16.24■□□□□ 0.19
HMGA2-211ENST00000545998 PTTG2Q9NZH5 202 aa16.24■□□□□ 0.19
HMGA2-211ENST00000545998 PRELID3BQ9Y3B1 194 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms