RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-229	ENST00000543393	EDARADD	Q8WWZ3	215 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	NEDD4L	Q96PU5	975 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	TECR	Q9NZ01	308 aa	Known RBP	13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	OR1A1	Q9P1Q5	309 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	RPL36	Q9Y3U8	105 aa	Known RBP	13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	SELENOK	Q9Y6D0	94 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	C2orf70	A6NJV1	201 aa		13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	NAPSA	O96009	420 aa		13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	RPS11	P62280	158 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	EXOSC2	Q13868	293 aa	Known RBP	13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	ZNF880	Q6PDB4	577 aa		13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	ADAD2	Q8NCV1	583 aa	Known RBP	13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	PHB2	Q99623	299 aa		13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	AKIP1	Q9NQ31	210 aa		13.66	□□□□□ -0.22
RAP1B-229	ENST00000543393	LALBA	P00709	142 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	ZBTB25	P24278	435 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	RHOG	P84095	191 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	YIF1B	Q5BJH7	314 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	C1orf146	Q5VVC0	180 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	TMPRSS11A	Q6ZMR5	421 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	KCNG3	Q8TAE7	436 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	FGF20	Q9NP95	211 aa	Predicted RBP	13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	SLC35D1	Q9NTN3	355 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	BABAM2	Q9NXR7	383 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	ZNF221	Q9UK13	617 aa		13.65	□□□□□ -0.22
RAP1B-229	ENST00000543393	VPS13D	Q5THJ4	4388 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	TRBV5-7	A0A0A0MS05	114 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	MSGN1	A6NI15	193 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	FAM223B	A6NKX1	122 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	PRH1	P02810	166 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	OR9G9	P0C7N8	305 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	ATP5G2	Q06055	141 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	FAM223A	Q8IWN6	122 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	OR52B4	Q8NGK2	314 aa		13.64	□□□□□ -0.23
RAP1B-229	ENST00000543393	BMI1	P35226	326 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	MRGPRG-AS1	Q2M3A8	158 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	MOB1B	Q7L9L4	216 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	TMEM61	Q8N0U2	210 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	ZFP41	Q8N8Y5	198 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	CACNG8	Q8WXS5	425 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	THRSP	Q92748	146 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	PTX4	Q96A99	478 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	PGLYRP3	Q96LB9	341 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	HARBI1	Q96MB7	349 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	GHRL	Q9UBU3	117 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	TP53TG1	Q9Y2A0	90 aa		13.63	□□□□□ -0.23
RAP1B-229	ENST00000543393	PPP5D1	E7EU14	171 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393		M0R1X1	148 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	DYNC1I1	O14576	645 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	SPRY2	O43597	315 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	TUSC2	O75896	110 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	HLA-A	P01891	365 aa	Known RBP	13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	ATF4	P18848	351 aa	Predicted RBP	13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	CBLN1	P23435	193 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	ZNF45	Q02386	682 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	OR10K2	Q6IF99	312 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	APH1B	Q8WW43	257 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	UQCC2	Q9BRT2	126 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	DMRT1	Q9Y5R6	373 aa		13.62	□□□□□ -0.23
RAP1B-229	ENST00000543393	TRBV9	A0A0B4J1U6	114 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	SRRM4	A7MD48	611 aa	Known RBP	13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	LGALS9	O00182	355 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	DCK	P27707	260 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	HTR2C	P28335	458 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	HLA-DRB3	P79483	266 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	ZNF57	Q68EA5	555 aa	Predicted RBP	13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393		Q6ZWC4	215 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	NKAIN3	Q8N8D7	197 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	SLC29A1	Q99808	456 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	NICN1	Q9BSH3	213 aa		13.61	□□□□□ -0.23
RAP1B-229	ENST00000543393	SHOX	O15266	292 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	MPPED1	O15442	326 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	SCAF4	O95104	1147 aa	Known RBP	13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	OR2C1	O95371	312 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	SCT	P09683	121 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	RPS27A	P62979	156 aa	Known RBP	13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	TNXA	Q16473	311 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	SMN1	Q16637	294 aa	Known RBP	13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	DEFB135	Q30KP9	77 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	SRSF12	Q8WXF0	261 aa	Known RBP	13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	DERL3	Q96Q80	235 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	MLX	Q9UH92	298 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	CLEC2D	Q9UHP7	191 aa		13.6	□□□□□ -0.23
RAP1B-229	ENST00000543393	TRBV6-6	A0A0A6YYG2	114 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	GGCT	O75223	188 aa	Known RBP	13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PRR20E	P86478	221 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PRR20C	P86479	221 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PRR20D	P86480	221 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PRR20B	P86481	221 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PRR20A	P86496	221 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	ANKRD55	Q3KP44	614 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	TM4SF20	Q53R12	229 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	CBR4	Q8N4T8	237 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	TMEM59	Q9BXS4	323 aa		13.59	□□□□□ -0.23

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