RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 SLC35D1Q9NTN3 355 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 TUSC2O75896 110 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 APOA1P02647 267 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 ELANEP08246 267 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 RRASP10301 218 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 NFYAP23511 347 aaPredicted RBP12.77□□□□□ -0.37
CIT-212ENST00000543239 LINC00205P59089 165 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 TAS2R20P59543 309 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 ARPC4P59998 168 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
CIT-212ENST00000543239 CBX3Q13185 183 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 FOXE3Q13461 319 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 PLGLAQ15195 96 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 PSG5Q15238 335 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 GPR107Q5VW38 600 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 ZNF645Q8N7E2 425 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 GVQW1Q8N7I0 195 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 RNF152Q8N8N0 203 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
CIT-212ENST00000543239 ATP6V0E1O15342 81 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 IGHG4P01861 327 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 PTHLHP12272 177 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 DUTP33316 252 aaKnown RBP12.76□□□□□ -0.37
CIT-212ENST00000543239 LGALS7P47929 136 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 RPS16P62249 146 aaKnown RBP12.76□□□□□ -0.37
CIT-212ENST00000543239 RTL8BQ17RB0 113 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 CXorf66Q5JRM2 361 aaPredicted RBP12.76□□□□□ -0.37
CIT-212ENST00000543239 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
CIT-212ENST00000543239 DDB2Q92466 427 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 AP3S1Q92572 193 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 PARP11Q9NR21 331 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 NECAP2Q9NVZ3 263 aa12.76□□□□□ -0.37
CIT-212ENST00000543239 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
CIT-212ENST00000543239 PF4P02776 101 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 EIF4EP06730 217 aaKnown RBP12.75□□□□□ -0.37
CIT-212ENST00000543239 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
CIT-212ENST00000543239 CX3CL1P78423 397 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 MZT2AQ6P582 158 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 OR5AP2Q8NGF4 316 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 SNAPC3Q92966 411 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 IFT46Q9NQC8 304 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
CIT-212ENST00000543239 CMYA5Q8N3K9 4069 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 TRAV41A0A0B4J266 112 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 IGKV1D-13A0A0B4J2D9 117 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 SMIM31A0A1B0GVY4 71 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 IGKV1-13P0DP09 117 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 PPIFP30405 207 aaKnown RBP12.74□□□□□ -0.37
CIT-212ENST00000543239 MSMO1Q15800 293 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 BVESQ8NE79 360 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
CIT-212ENST00000543239 RBMX2Q9Y388 322 aaKnown RBP12.74□□□□□ -0.37
CIT-212ENST00000543239 LINC00473A8K010 186 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 J3QRK9 145 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 FCN1O00602 326 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 SLC25A17O43808 307 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 IGLV2-23P01705 113 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 RPLP1P05386 114 aaKnown RBP12.73□□□□□ -0.37
CIT-212ENST00000543239 ZNF182P17025 639 aaPredicted RBP12.73□□□□□ -0.37
CIT-212ENST00000543239 PSMB8P28062 276 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 FCGR2CP31995 323 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 PRSS3P35030 304 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 CDX1P47902 265 aaPredicted RBP12.73□□□□□ -0.37
CIT-212ENST00000543239 NDPQ00604 133 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 CDK10Q15131 360 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 SAMD5Q5TGI4 173 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 ZNF562Q6V9R5 426 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 OVCH2Q7RTZ1 564 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 PPP1R27Q86WC6 154 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 ZNF695Q8IW36 515 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 MINDY2Q8NBR6 621 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 WFDC9Q8NEX5 89 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 OSR1Q8TAX0 266 aaPredicted RBP12.73□□□□□ -0.37
CIT-212ENST00000543239 BCL7BQ9BQE9 202 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 PRELID3BQ9Y3B1 194 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
CIT-212ENST00000543239 MEIS3P1A6NDR6 274 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 NUDT19A8MXV4 375 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 G3V318 75 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 SHOXO15266 292 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 CA2P00918 260 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 PPYP01298 95 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 NAT1P18440 290 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 ELK1P19419 428 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 CD33P20138 364 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 DEFA6Q01524 100 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 TMEM267Q0VDI3 215 aaPredicted RBP12.72□□□□□ -0.37
CIT-212ENST00000543239 C19orf54Q5BKX5 351 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 MYOZ3Q8TDC0 251 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 RAB2BQ8WUD1 216 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 GIMAP1Q8WWP7 306 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 HSD17B10Q99714 261 aaKnown RBP12.72□□□□□ -0.37
CIT-212ENST00000543239 SCPEP1Q9HB40 452 aa12.72□□□□□ -0.37
CIT-212ENST00000543239 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms