RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 OR4S1Q8NGB4 309 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 OR4M1Q8NGD0 313 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 OR51D1Q8NGF3 324 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 PINX1Q96BK5 328 aaKnown RBP4.17□□□□□ -1.74
CLIP1-217ENST00000543205 FAM3DQ96BQ1 224 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 THAP7Q9BT49 309 aaPredicted RBP4.17□□□□□ -1.74
CLIP1-217ENST00000543205 DCTN5Q9BTE1 182 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 TMEM59Q9BXS4 323 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 CHST6Q9GZX3 395 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 SHARPINQ9H0F6 387 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 RPUSD1Q9UJJ7 312 aaKnown RBP4.17□□□□□ -1.74
CLIP1-217ENST00000543205 INSIG2Q9Y5U4 225 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 PUS1Q9Y606 427 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLIP1-217ENST00000543205 AUP1Q9Y679 476 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 CR1P17927 2039 aa4.17□□□□□ -1.74
CLIP1-217ENST00000543205 RAB19A4D1S5 217 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TMEM14DPA8MWL7 114 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SMLR1H3BR10 107 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 AIPO00170 330 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 MGST3O14880 152 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF737O75373 536 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 FCN3O75636 299 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SERPINE2P07093 398 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 PSMB6P28072 239 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TGFBR1P36897 503 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SERPINB10P48595 397 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 RPS27AP62979 156 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 PAX8Q06710 450 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 FAM120AOSQ5T036 256 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 IDNKQ5T6J7 187 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 OR10K2Q6IF99 312 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SFXN4Q6P4A7 337 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 C17orf107Q6ZR85 190 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 OR2W3Q7Z3T1 314 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 BPIFB2Q8N4F0 458 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TEX29Q8N6K0 151 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SUMF2Q8NBJ7 301 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 NEK7Q8TDX7 302 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 C1orf147Q96MC9 270 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 NEDD4LQ96PU5 975 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 URM1Q9BTM9 101 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 BARHL1Q9BZE3 327 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 PPA2Q9H2U2 334 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 AURKAIP1Q9NWT8 199 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 DAPK2Q9UIK4 370 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 RAB22AQ9UL26 194 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TNFRSF18Q9Y5U5 241 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 FLNAP21333 2647 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TMEM272A0A1B0GTI8 110 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 hADV38S2A0JD32 116 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 MARCH11A6NNE9 402 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SRRM4A7MD48 611 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 MCRIP1C9JLW8 97 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 INAFM1C9JVW0 142 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 HSPA12AO43301 675 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 OR2J3O76001 311 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 GABARAPO95166 117 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 CSN2P05814 226 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 FCER2P06734 321 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SLC2A2P11168 524 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 FUT3P21217 361 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 ERP29P30040 261 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 SRP14P37108 136 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 ID1P41134 155 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 KCNJ3P48549 501 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 NCS1P62166 190 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 ARF6P62330 175 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 QRFPP83859 136 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 PAX2Q02962 417 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 MEF2CQ06413 473 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 AESQ08117 197 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 UNC119Q13432 240 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 RBM39Q14498 530 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 ATXN7L3Q14CW9 347 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 FAM189A2Q15884 450 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 USP43Q70EL4 1123 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TRAPPC6BQ86SZ2 158 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 NR2C2APQ86WQ0 139 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 CLVS1Q8IUQ0 354 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 TPRX1Q8N7U7 411 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 LY6G5BQ8NDX9 201 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 OR9G4Q8NGQ1 327 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 C8orf46Q8TAG6 207 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 NDUFAF3Q9BU61 184 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 BEX2Q9BXY8 128 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 NAA50Q9GZZ1 169 aaKnown RBP4.16□□□□□ -1.74
CLIP1-217ENST00000543205 C19orf12Q9NSK7 152 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 PEX16Q9Y5Y5 336 aa4.16□□□□□ -1.74
CLIP1-217ENST00000543205 MEIKINA0A087WXM9 373 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 TRGV10A0A0A0MS01 117 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 A0A1B0GW15 77 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 A0A1W2PPE3 182 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 ITGB1BP1O14713 200 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 PDCD6O75340 191 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 CHATP28329 748 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 BLVRBP30043 206 aaPredicted RBP4.15□□□□□ -1.75
CLIP1-217ENST00000543205 GLIPR1P48060 266 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 TMBIM6P55061 237 aa4.15□□□□□ -1.75
CLIP1-217ENST00000543205 POLR2GP62487 172 aaKnown RBP eCLIP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms