RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 RANBP1P43487 201 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 LGALS7P47929 136 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 CBX3Q13185 183 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 TATDN3Q17R31 274 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 FAM89BQ8N5H3 189 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 TMEM68Q96MH6 324 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 SLC35D1Q9NTN3 355 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 RDH8Q9NYR8 311 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 TENM2Q9NT68 2774 aa13.35□□□□□ -0.27
PPP1CA-210ENST00000542876 A8MZ25 164 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 TRDCB7Z8K6 153 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 SLC17A2O00624 439 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 PROP1O75360 226 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 AADACP22760 399 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 SERPINB10P48595 397 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 VEGFCP49767 419 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 LINC00205P59089 165 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 RAB11BQ15907 218 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 LIPKQ5VXJ0 399 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 Q8N1Y9 231 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 OR56B1Q8NGI3 324 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 OR9G4Q8NGQ1 327 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 ARHGAP5-AS1Q96IT6 56 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
PPP1CA-210ENST00000542876 ARL6IP5O75915 188 aa13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 SNRPBP14678 240 aaKnown RBP13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 OGFRL1Q5TC84 451 aaPredicted RBP13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 GTSCR1Q86UQ5 136 aa13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 OR4A4PQ8NGN8 299 aa13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 SPATA25Q9BR10 227 aa13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 PECRQ9BY49 303 aa13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 NKX1-2Q9UD57 310 aaPredicted RBP13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 LSM2Q9Y333 95 aaKnown RBP13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 AK6Q9Y3D8 172 aaKnown RBP13.33□□□□□ -0.28
PPP1CA-210ENST00000542876 DYNC2H1Q8NCM8 4307 aaKnown RBP13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 LCE6AA0A183 80 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 TMEM50BP56557 158 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 SYNJ2BPP57105 145 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 TAGLNQ01995 201 aaKnown RBP13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 KLF5Q13887 457 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 TRAM1Q15629 374 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 HARBI1Q96MB7 349 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 PHB2Q99623 299 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 TUBA4BQ9H853 241 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 COA4Q9NYJ1 87 aa13.32□□□□□ -0.28
PPP1CA-210ENST00000542876 DNAH7Q8WXX0 4024 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 IGKV1-6A0A0C4DH72 117 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 FOXI3A8MTJ6 420 aaPredicted RBP13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 BET1O15155 118 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 SHOXO15266 292 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 FABP7O15540 132 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 IFNA6P05013 189 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 CD3GP09693 182 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 LCN12Q6JVE5 192 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 OR10J5Q8NHC4 309 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 FAM3DQ96BQ1 224 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 USMG5Q96IX5 58 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 TINAGL1Q9GZM7 467 aaPredicted RBP13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 OR2D2Q9H210 308 aa13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 PEF1Q9UBV8 284 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 RRP15Q9Y3B9 282 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 RBM7Q9Y580 266 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-210ENST00000542876 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 DENRO43583 198 aaKnown RBP13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 BRI3O95415 125 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 IGLV2-23P01705 113 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 CLDN12P56749 244 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 C2orf76Q3KRA6 126 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 GFI1Q99684 422 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 SDHAF2Q9NX18 166 aa13.3□□□□□ -0.28
PPP1CA-210ENST00000542876 A0A0B4J203 849 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 RRASP10301 218 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 CALRP27797 417 aaKnown RBP13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 PSMD7P51665 324 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 VMA21Q3ZAQ7 101 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 PLAC9Q5JTB6 97 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 ZNF343Q6P1L6 599 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 TMEM91Q6ZNR0 172 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 Q8N402 240 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 BVESQ8NE79 360 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 RAB3CQ96E17 227 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 GAR1Q9NY12 217 aaKnown RBP13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 TPRKBQ9Y3C4 175 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 RYR2Q92736 4967 aa13.29□□□□□ -0.28
PPP1CA-210ENST00000542876 MPPED1O15442 326 aa13.28□□□□□ -0.28
PPP1CA-210ENST00000542876 CRYGBP07316 175 aa13.28□□□□□ -0.28
PPP1CA-210ENST00000542876 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
PPP1CA-210ENST00000542876 SSBP2P81877 361 aaPredicted RBP13.28□□□□□ -0.28
PPP1CA-210ENST00000542876 TPBGQ13641 420 aa13.28□□□□□ -0.28
PPP1CA-210ENST00000542876 HAGHQ16775 308 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms