RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 OR51J1Q9H342 316 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 LINC00527Q9UJ94 153 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 SLC22A5O76082 557 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 IGHG4P01861 327 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 EIF4EP06730 217 aaKnown RBP10.29□□□□□ -0.76
LTBR-208ENST00000541005 DUTP33316 252 aaKnown RBP10.29□□□□□ -0.76
LTBR-208ENST00000541005 RORCP51449 518 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 LUMP51884 338 aaPredicted RBP10.29□□□□□ -0.76
LTBR-208ENST00000541005 TAS2R20P59543 309 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 RPL23AP62750 156 aaKnown RBP10.29□□□□□ -0.76
LTBR-208ENST00000541005 GPR107Q5VW38 600 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 ZNF645Q8N7E2 425 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 SNAPC3Q92966 411 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 FLYWCH2Q96CP2 140 aaKnown RBP10.29□□□□□ -0.76
LTBR-208ENST00000541005 SLC35D1Q9NTN3 355 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 ZFP57Q9NU63 452 aa10.29□□□□□ -0.76
LTBR-208ENST00000541005 RBM7Q9Y580 266 aaKnown RBP10.29□□□□□ -0.76
LTBR-208ENST00000541005 IGKV1D-13A0A0B4J2D9 117 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 ATP6V0E1O15342 81 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 IGLV2-14P01704 120 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 IGLV2-23P01705 113 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 ELANEP08246 267 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 IGKV1-13P0DP09 117 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 RRASP10301 218 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 PTHLHP12272 177 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 VDAC1P21796 283 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 NFYAP23511 347 aaPredicted RBP10.28□□□□□ -0.76
LTBR-208ENST00000541005 PSMB8P28062 276 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 ARPC4P59998 168 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 NDPQ00604 133 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 PSG5Q15238 335 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 MSMO1Q15800 293 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 RTL8BQ17RB0 113 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 TMEM177Q53S58 311 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 ZNF660Q6AZW8 331 aaPredicted RBP10.28□□□□□ -0.76
LTBR-208ENST00000541005 GVQW1Q8N7I0 195 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 MYOZ3Q8TDC0 251 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 AP3S1Q92572 193 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 FBXL15Q9H469 300 aa10.28□□□□□ -0.76
LTBR-208ENST00000541005 PF4V1P10720 104 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 ZNF182P17025 639 aaPredicted RBP10.27□□□□□ -0.77
LTBR-208ENST00000541005 NAT1P18440 290 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 PPIFP30405 207 aaKnown RBP10.27□□□□□ -0.77
LTBR-208ENST00000541005 LGALS7P47929 136 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 EIF4EBP1Q13541 118 aaPredicted RBP10.27□□□□□ -0.77
LTBR-208ENST00000541005 CXorf66Q5JRM2 361 aaPredicted RBP10.27□□□□□ -0.77
LTBR-208ENST00000541005 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 OVCH2Q7RTZ1 564 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 BCL7BQ9BQE9 202 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 NECAP2Q9NVZ3 263 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 COMMD3Q9UBI1 195 aa10.27□□□□□ -0.77
LTBR-208ENST00000541005 METTL1Q9UBP6 276 aaKnown RBP10.27□□□□□ -0.77
LTBR-208ENST00000541005 RBMX2Q9Y388 322 aaKnown RBP10.27□□□□□ -0.77
LTBR-208ENST00000541005 LINC00473A8K010 186 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 CRYGBP07316 175 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 RPS16P62249 146 aaKnown RBP10.26□□□□□ -0.77
LTBR-208ENST00000541005 CX3CL1P78423 397 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 CBX3Q13185 183 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 PLGLAQ15195 96 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
LTBR-208ENST00000541005 SAMD5Q5TGI4 173 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 MZT2AQ6P582 158 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 ZNF562Q6V9R5 426 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 ETV3LQ6ZN32 361 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 TCTEX1D1Q8N7M0 179 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 MINDY2Q8NBR6 621 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 OR5AP2Q8NGF4 316 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 RAB2BQ8WUD1 216 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 HARBI1Q96MB7 349 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
LTBR-208ENST00000541005 SCPEP1Q9HB40 452 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 IFT46Q9NQC8 304 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 PARP11Q9NR21 331 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 ADAM30Q9UKF2 790 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 FBXO7Q9Y3I1 522 aa10.26□□□□□ -0.77
LTBR-208ENST00000541005 TRAV41A0A0B4J266 112 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 G3V318 75 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 FCN1O00602 326 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 SLC25A17O43808 307 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 HPGDSO60760 199 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 PPYP01298 95 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 RPLP1P05386 114 aaKnown RBP10.25□□□□□ -0.77
LTBR-208ENST00000541005 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
LTBR-208ENST00000541005 ELK1P19419 428 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 AADACP22760 399 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 FCGR2CP31995 323 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 PRSS3P35030 304 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 RPL5P46777 297 aaKnown RBP10.25□□□□□ -0.77
LTBR-208ENST00000541005 CDX1P47902 265 aaPredicted RBP10.25□□□□□ -0.77
LTBR-208ENST00000541005 TMBIM6P55061 237 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 TAS2R46P59540 309 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 CDK10Q15131 360 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 KCTD9Q7L273 389 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 ZNF695Q8IW36 515 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 BVESQ8NE79 360 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 OSR1Q8TAX0 266 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms