RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 J3QRK9 145 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 CTDSPLO15194 276 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 DUTP33316 252 aaKnown RBP17.5■□□□□ 0.39
TRIM65-202ENST00000540128 THBS3P49746 956 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 PYHIN1Q6K0P9 492 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 PDPNQ86YL7 162 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 DDB2Q92466 427 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 EHFQ9NZC4 300 aa17.5■□□□□ 0.39
TRIM65-202ENST00000540128 RBMX2Q9Y388 322 aaKnown RBP17.5■□□□□ 0.39
TRIM65-202ENST00000540128 GABARAPH6UMI1 98 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 NDUFA3O95167 84 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 IGHG2P01859 326 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 APOA2P02652 100 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 PMP2P02689 132 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 HLA-DMAP28067 261 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 VDAC2P45880 294 aaPredicted RBP17.49■□□□□ 0.39
TRIM65-202ENST00000540128 EIF4EBP1Q13541 118 aaPredicted RBP17.49■□□□□ 0.39
TRIM65-202ENST00000540128 MMDQ15546 238 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 KLHDC1Q8N7A1 406 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 FCAMRQ8WWV6 532 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 KLK11Q9UBX7 282 aa17.49■□□□□ 0.39
TRIM65-202ENST00000540128 H7C2Y5 167 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 NBR2O15453 112 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 HRH1P35367 487 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 SSBP1Q04837 148 aaKnown RBP17.48■□□□□ 0.39
TRIM65-202ENST00000540128 SRSF4Q08170 494 aaKnown RBP17.48■□□□□ 0.39
TRIM65-202ENST00000540128 TMEM95Q3KNT9 176 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 ZBTB34Q8NCN2 500 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 RASL11BQ9BPW5 248 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 SLC35D1Q9NTN3 355 aa17.48■□□□□ 0.39
TRIM65-202ENST00000540128 IGKV1-16P04430 117 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 RRASP10301 218 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 CNTFRP26992 372 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 C5orf64Q2M2E5 130 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 ACTBL2Q562R1 376 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 ARSJQ5FYB0 599 aaPredicted RBP17.47■□□□□ 0.39
TRIM65-202ENST00000540128 C9orf152Q5JTZ5 239 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 VAX1Q5SQQ9 334 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 FOXB2Q5VYV0 432 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 MOB3AQ96BX8 217 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 FLYWCH2Q96CP2 140 aaKnown RBP17.47■□□□□ 0.39
TRIM65-202ENST00000540128 HSD17B10Q99714 261 aaKnown RBP17.47■□□□□ 0.39
TRIM65-202ENST00000540128 ZNF107Q9UII5 783 aaPredicted RBP17.47■□□□□ 0.39
TRIM65-202ENST00000540128 ANK2Q01484 3957 aa17.47■□□□□ 0.39
TRIM65-202ENST00000540128 LINC00473A8K010 186 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 VSIG10L2P0DP72 767 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 TBPP20226 339 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 LGALS7P47929 136 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 DGCR2P98153 550 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 OR6F1Q8NGZ6 308 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 SMIM4Q8WVI0 70 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 CCL28Q9NRJ3 127 aa17.46■□□□□ 0.39
TRIM65-202ENST00000540128 FBN3Q75N90 2809 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 FABP12A6NFH5 140 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 RRHO14718 337 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 IL18Q14116 193 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 TMEM177Q53S58 311 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 ZNF66Q6ZN08 573 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 SLC35E3Q7Z769 313 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 BVESQ8NE79 360 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 SECTM1Q8WVN6 248 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 TSNAXQ99598 290 aaKnown RBP17.45■□□□□ 0.38
TRIM65-202ENST00000540128 ZNF2Q9BSG1 426 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-202ENST00000540128 SLC5A7Q9GZV3 580 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 KIAA1456Q9P272 454 aa17.45■□□□□ 0.38
TRIM65-202ENST00000540128 LINC01548A6NM66 108 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 GSTZ1O43708 216 aaPredicted RBP17.44■□□□□ 0.38
TRIM65-202ENST00000540128 PEX14O75381 377 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 SPDEFO95238 335 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 HLA-DRB1P01911 266 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 CD74P04233 296 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 HERV-K104P61576 105 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 RPS16P62249 146 aaKnown RBP17.44■□□□□ 0.38
TRIM65-202ENST00000540128 PSG5Q15238 335 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 RTL8BQ17RB0 113 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 RNASE12Q5GAN4 147 aaKnown RBP17.44■□□□□ 0.38
TRIM65-202ENST00000540128 LIN54Q6MZP7 749 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 TMEM229BQ8NBD8 167 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 ZNF580Q9UK33 172 aa17.44■□□□□ 0.38
TRIM65-202ENST00000540128 KCNAB3O43448 404 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 IGLV2-23P01705 113 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 GNRHRP30968 328 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 FXYD4P59646 89 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 RPL30P62888 115 aaKnown RBP17.43■□□□□ 0.38
TRIM65-202ENST00000540128 MFSD4AQ8N468 514 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 BORCS5Q969J3 196 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 HSPB9Q9BQS6 159 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 PRELID3BQ9Y3B1 194 aa17.43■□□□□ 0.38
TRIM65-202ENST00000540128 PLXNB1O43157 2135 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 CD3DP04234 171 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 S100A5P33763 92 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 TAS2R19P59542 299 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 TSPAN5P62079 268 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 CBX3Q13185 183 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 CENPVQ7Z7K6 275 aaPredicted RBP17.42■□□□□ 0.38
TRIM65-202ENST00000540128 CCDC190Q86UF4 302 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 FOXRED2Q8IWF2 684 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 FBXL15Q9H469 300 aa17.42■□□□□ 0.38
TRIM65-202ENST00000540128 M0QYG6 137 aa17.41■□□□□ 0.38
TRIM65-202ENST00000540128 AP4M1O00189 453 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms