RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 AP3S2P59780 193 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 GNMTQ14749 295 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 OR2AK2Q8NG84 335 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 EHFQ9NZC4 300 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
DDB1-216ENST00000539739 A0A1W2PRD5 423 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 A0A1W2PRF3 423 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 A0A1W2PRM7 423 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 UBE2CO00762 179 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 CD81P60033 236 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 RNASE10Q5GAN6 216 aaKnown RBP12.56□□□□□ -0.4
DDB1-216ENST00000539739 KLF17Q5JT82 389 aaPredicted RBP12.56□□□□□ -0.4
DDB1-216ENST00000539739 ZNF626Q68DY1 528 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 Q71RC1 249 aaPredicted RBP12.56□□□□□ -0.4
DDB1-216ENST00000539739 TMEM17Q86X19 198 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 C8orf31Q8N9H6 132 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 BEND2Q8NDZ0 799 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 NARS2Q96I59 477 aaKnown RBP12.56□□□□□ -0.4
DDB1-216ENST00000539739 TOLLIPQ9H0E2 274 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 CDC42EP3Q9UKI2 254 aa12.56□□□□□ -0.4
DDB1-216ENST00000539739 ITGB1BP1O14713 200 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 NPFFO15130 113 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 LYRM1O43325 122 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 LANCL1O43813 399 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 MPC2O95563 127 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 FSHBP01225 129 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 CD3DP04234 171 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 IFNA6P05013 189 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 RAB7AP51149 207 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 HLA-DRB5Q30154 266 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 MIDNQ504T8 468 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 FAM53AQ6NSI3 398 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 STEAP1BQ6NZ63 245 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 TOMM5Q8N4H5 51 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 NEU1Q99519 415 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 MS4A7Q9GZW8 240 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 RBM7Q9Y580 266 aaKnown RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 A0A1W2PPE3 182 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 ANKRD20A5PA0PJZ0 165 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 ODF3BA8MYP8 253 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 RAB3DO95716 219 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 AKAIN1P0CW23 69 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 PVALBP20472 110 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 PAX6P26367 422 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 RAB5BP61020 215 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 MEF2DQ14814 521 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 VAX1Q5SQQ9 334 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 UTF1Q5T230 341 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 SLC25A48Q6ZT89 311 aaKnown RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 H1FOOQ8IZA3 346 aaPredicted RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 ZNF439Q8NDP4 499 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 FAM216AQ8WUB2 273 aa12.55□□□□□ -0.4
DDB1-216ENST00000539739 TBL2Q9Y4P3 447 aaKnown RBP12.55□□□□□ -0.4
DDB1-216ENST00000539739 SVEP1Q4LDE5 3571 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 IGLV1-47P01700 117 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 CD74P04233 296 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 NMBP08949 121 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 IL3RAP26951 378 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 HTR1DP28221 377 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 FCGR2CP31995 323 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 FAUP35544 74 aaKnown RBP12.54□□□□□ -0.4
DDB1-216ENST00000539739 ZNF134P52741 427 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 CT45A1Q5HYN5 189 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
DDB1-216ENST00000539739 DHRS7BQ6IAN0 325 aaPredicted RBP12.54□□□□□ -0.4
DDB1-216ENST00000539739 BRD3OSQ6XYD6 125 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 OR4P4Q8NGL7 312 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 CT45A3Q8NHU0 189 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 GPR61Q9BZJ8 451 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 OR2W1Q9Y3N9 320 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
DDB1-216ENST00000539739 BUB1B-PAK6H3BSN5 160 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 TEX46H3BTG2 121 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 M0QYG6 137 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 IFNA2P01563 188 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 EPHA1P21709 976 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 SAA4P35542 130 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 CEACAM3P40198 252 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 RUSC1-AS1Q66K80 236 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 DHRS11Q6UWP2 260 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 SPAG16Q8N0X2 631 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 SSX3Q99909 188 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 C2orf88Q9BSF0 95 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 ZNF2Q9BSG1 426 aaPredicted RBP12.53□□□□□ -0.4
DDB1-216ENST00000539739 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms