RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 MINOS1-NBL1R4GNA1 71 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 PRRC2AP48634 2157 aaKnown RBP8.65□□□□□ -1.02
LEMD3-202ENST00000539442 NBPF19A0A087WUL8 3843 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 DUXBA0A1W2PPF3 345 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 HMX3A6NHT5 357 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 DBX1A6NMT0 343 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 LINC00473A8K010 186 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
LEMD3-202ENST00000539442 ARG1P05089 322 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 SERPINE2P07093 398 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 RPA2P15927 270 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 CEACAM3P40198 252 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 DLX1P56177 255 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
LEMD3-202ENST00000539442 KLRD1Q13241 179 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 ANKRD55Q3KP44 614 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 TGIF2LXQ8IUE1 241 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 GLYATL2Q8WU03 294 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 TMEM56Q96MV1 263 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 DPM3Q9P2X0 92 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.02
LEMD3-202ENST00000539442 TMEM56-RWDD3S4R434 201 aa8.65□□□□□ -1.02
LEMD3-202ENST00000539442 YLPM1P49750 1951 aaKnown RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 LEUTXA8MZ59 168 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 OOSP1A8MZH6 123 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 CDS2O95674 445 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 TGFAP01135 160 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 GAPDHP04406 335 aaKnown RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 SULT1A3P0DMM9 295 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 SULT1A4P0DMN0 295 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 RRASP10301 218 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 ZNF16P17020 682 aaPredicted RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 HLA-GP17693 338 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 RPL30P62888 115 aaKnown RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 ZNF816Q0VGE8 651 aaPredicted RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 SP6Q3SY56 376 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 MIDNQ504T8 468 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 CYB5R2Q6BCY4 276 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 LIN54Q6MZP7 749 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 C1orf229Q6ZS94 237 aaPredicted RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 SPAG16Q8N0X2 631 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 MAPK1IP1LQ8NDC0 245 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 DDB2Q92466 427 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 RBPMSQ93062 196 aaKnown RBP8.64□□□□□ -1.03
LEMD3-202ENST00000539442 LHX4Q969G2 390 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 RPEQ96AT9 228 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 GPHA2Q96T91 129 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 RAB18Q9NP72 206 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 ABCA2Q9BZC7 2435 aa8.64□□□□□ -1.03
LEMD3-202ENST00000539442 PDZD2O15018 2839 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 CREBBPQ92793 2442 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 LY6LH3BQJ8 138 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ATG12O94817 140 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 APOA2P02652 100 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 CT45A6P0DMU7 189 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 CT45A5P0DMU8 189 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 CT45A7P0DMV0 189 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 EPHA1P21709 976 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 LGALS4P56470 323 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 PRB3Q04118 309 aaPredicted RBP8.63□□□□□ -1.03
LEMD3-202ENST00000539442 FCN2Q15485 313 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ZNF585BQ52M93 769 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 TPTE2P1Q5T6R2 138 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 TMEM268Q5VZI3 342 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 DHRS7BQ6IAN0 325 aaPredicted RBP8.63□□□□□ -1.03
LEMD3-202ENST00000539442 CCDC144NLQ6NUI1 221 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ZNF695Q8IW36 515 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 OR8H3Q8N146 312 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ZNF383Q8NA42 475 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 DRAXINQ8NBI3 349 aaPredicted RBP8.63□□□□□ -1.03
LEMD3-202ENST00000539442 UXS1Q8NBZ7 420 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 OR5AN1Q8NGI8 311 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 OR5M8Q8NGP6 311 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 OR4S2Q8NH73 311 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ASB13Q8WXK3 278 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 C18orf12Q96KH6 178 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 NABP2Q9BQ15 211 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 MRPL20Q9BYC9 149 aaKnown RBP8.63□□□□□ -1.03
LEMD3-202ENST00000539442 COMMD9Q9P000 198 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 MGAT4CQ9UBM8 478 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 MED13LQ71F56 2210 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ARHGAP32A7KAX9 2087 aa8.63□□□□□ -1.03
LEMD3-202ENST00000539442 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 TRAV40A0A0B4J280 105 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 IGHV1-69DA0A0B4J2H0 117 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 CENPVL3A0A0U1RRI6 287 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 H0YJW9 148 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 GOSR2O14653 212 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 NPFFO15130 113 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 FCGR3BO75015 233 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 HPRT1P00492 218 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 IFNA21P01568 189 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 IGHV1-69P01742 117 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 VDAC1P21796 283 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 MC5RP33032 325 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 LPAR6P43657 344 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 REG1BP48304 166 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 RAB13P51153 203 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 BRWD1-AS2P59051 145 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms