RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 OR4C12Q96R67 309 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 NCOR1P1Q9H4R4 102 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 OOEPA6NGQ2 149 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 HOXA5P20719 270 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 PCP4P48539 62 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 ERVS71-1P61550 626 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 RAB11AP62491 216 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 TNFRSF9Q07011 255 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 KIAA0141Q14154 515 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 SPANXN5Q5MJ07 72 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 MRGPRGQ86SM5 289 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 UBALD1Q8TB05 177 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 RCC1LQ96I51 464 aaKnown RBP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 ZNF665Q9H7R5 613 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 HSPB7Q9UBY9 170 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 ZFP92A6NM28 416 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 ZNF729A6NN14 1252 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 IFNA1P01562 189 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 GRPP07492 148 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 EIF4EBP1Q13541 118 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 LCN15Q6UWW0 184 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 CENPVQ7Z7K6 275 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 CA5BP1Q8WTZ4 195 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 TAF15Q92804 592 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDCA3-207ENST00000538862 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
CDCA3-207ENST00000538862 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 HECTD1Q9ULT8 2610 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 PSPNO60542 156 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 CXCL1P09341 107 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 P0C879 139 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 TUBG1P23258 451 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 PMP22Q01453 160 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 SLC38A11Q08AI6 406 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 C21orf62-AS1Q17RA5 79 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 Q6ZT83 130 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 PRR7Q8TB68 274 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-207ENST00000538862 RBKSQ9H477 322 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 TUBG2Q9NRH3 451 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 CLCF1Q9UBD9 225 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 KIAA2026Q5HYC2 2103 aa12.18□□□□□ -0.46
CDCA3-207ENST00000538862 TRAV17A0A0B4J275 112 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 IL2RGP31785 369 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 OR3A1P47881 315 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 RND2P52198 227 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 CATR1Q13166 79 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 FAM214BQ7L5A3 538 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 C11orf53Q8IXP5 236 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 ZNF610Q8N9Z0 462 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 OR1L1Q8NH94 360 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 TAAR6Q96RI8 345 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 OR2D2Q9H210 308 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 OBP2BQ9NPH6 170 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-207ENST00000538862 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
CDCA3-207ENST00000538862 POLEQ07864 2286 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 TGOLN2O43493 480 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 LYZL6O75951 148 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 CLDN1O95832 211 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 CYB5R3P00387 301 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-207ENST00000538862 IGHG3P01860 377 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 MPV17P39210 176 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-207ENST00000538862 COTL1Q14019 142 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 SSX7Q7RTT5 188 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 CXXC4Q9H2H0 198 aa12.17□□□□□ -0.46
CDCA3-207ENST00000538862 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
CDCA3-207ENST00000538862 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
CDCA3-207ENST00000538862 LRRC30A6NM36 301 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 HBZP02008 142 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDCA3-207ENST00000538862 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
CDCA3-207ENST00000538862 GUSBP1Q15486 140 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 NINJ1Q92982 152 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 MRPL37Q9BZE1 423 aaKnown RBP12.16□□□□□ -0.46
CDCA3-207ENST00000538862 SLC39A9Q9NUM3 307 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 LAMP3Q9UQV4 416 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 DMRT1Q9Y5R6 373 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
CDCA3-207ENST00000538862 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 CLDN34H7C241 214 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 MLNRO43193 412 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 RAMP3O60896 148 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 IGKV3-15P01624 115 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms