RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 OR8U8P0C7N1 319 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 C1orf174Q8IYL3 243 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 ZNF561Q8N587 486 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 NIPSNAP3BQ9BS92 247 aa20.73■□□□□ 0.91
RAB40C-204ENST00000538492 A0A1W2PPE3 182 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 CRYAAP02489 173 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 AGAP20933 346 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 RAB11AP62491 216 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 TMEM41BQ5BJD5 291 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 NCR3LG1Q68D85 454 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 IGFL3Q6UXB1 125 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 ZNF66Q6ZN08 573 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 HSD17B10Q99714 261 aaKnown RBP20.72■□□□□ 0.91
RAB40C-204ENST00000538492 ATMQ13315 3056 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 MARCH11A6NNE9 402 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 ADH4P08319 380 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 HTD2P86397 168 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 TIMM23BQ5SRD1 257 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 MBD3L1Q8WWY6 194 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 FAM234AQ9H0X4 552 aa20.72■□□□□ 0.91
RAB40C-204ENST00000538492 BCL2P10415 239 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 GPR12P47775 334 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 EDDM3BP56851 147 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 FAM201AQ5SY85 155 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 RAB29O14966 203 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 PROP1O75360 226 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 S100A6P06703 90 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 KLF3P57682 345 aaPredicted RBP20.71■□□□□ 0.91
RAB40C-204ENST00000538492 EIF2S3LQ2VIR3 472 aaKnown RBP20.71■□□□□ 0.91
RAB40C-204ENST00000538492 WASF3Q9UPY6 502 aa20.71■□□□□ 0.91
RAB40C-204ENST00000538492 TM4SF5O14894 197 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 IGKV1D-33P01593 117 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 IGKV1-33P01594 117 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 TVP23CQ96ET8 276 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 HCFC1P51610 2035 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 MAP1LC3B2A6NCE7 125 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 ZNF98A6NK75 572 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 CEBPZOSA8MTT3 80 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 TRAT1Q6PIZ9 186 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 Q6ZS92 163 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 MUCL1Q96DR8 90 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 MEGF10Q96KG7 1140 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 PARD6GQ9BYG4 376 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-204ENST00000538492 MAP1LC3BQ9GZQ8 125 aa20.7■□□□□ 0.9
RAB40C-204ENST00000538492 HMGB3O15347 200 aaKnown RBP20.69■□□□□ 0.9
RAB40C-204ENST00000538492 FCGR3BO75015 233 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 GZMHP20718 246 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 MORN2Q502X0 79 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 C12orf57Q99622 126 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 CISD1Q9NZ45 108 aaKnown RBP20.69■□□□□ 0.9
RAB40C-204ENST00000538492 PLCE1Q9P212 2302 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 PAX5Q02548 391 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 C1orf185Q5T7R7 199 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 SSX9Q7RTT3 188 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 RPP25LQ8N5L8 163 aaKnown RBP20.69■□□□□ 0.9
RAB40C-204ENST00000538492 TCTEX1D1Q8N7M0 179 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 ITLN1Q8WWA0 313 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 EDARADDQ8WWZ3 215 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 PINX1Q96BK5 328 aaKnown RBP20.69■□□□□ 0.9
RAB40C-204ENST00000538492 R3HDM4Q96D70 268 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 SNX22Q96L94 193 aa20.69■□□□□ 0.9
RAB40C-204ENST00000538492 PMS2P5A8MQ11 134 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 MGST3O14880 152 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 SELLP14151 372 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 DUTP33316 252 aaKnown RBP20.68■□□□□ 0.9
RAB40C-204ENST00000538492 ZNF343Q6P1L6 599 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 ACSM6Q6P461 480 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 OR10P1Q8NGE3 313 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 YPEL4Q96NS1 127 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 LAMP3Q9UQV4 416 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 URGCP-MRPS24S4R325 110 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 DSCAMO60469 2012 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 GLRXP35754 106 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 EIF2S3P41091 472 aaKnown RBP20.68■□□□□ 0.9
RAB40C-204ENST00000538492 RPL39P5Q59GN2 51 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 FAM90A2PQ658T7 463 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 C22orf34Q6ZV56 151 aa20.68■□□□□ 0.9
RAB40C-204ENST00000538492 QTRT1Q9BXR0 403 aaKnown RBP20.68■□□□□ 0.9
RAB40C-204ENST00000538492 OR9G9P0C7N8 305 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 ZNF134P52741 427 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 RBMXL3Q8N7X1 1067 aaKnown RBP20.67■□□□□ 0.9
RAB40C-204ENST00000538492 TMEM147Q9BVK8 224 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 SLC39A9Q9NUM3 307 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 C5orf52A6NGY3 159 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 IFNA4P05014 189 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 FGF7P21781 194 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 NKX6-1P78426 367 aaPredicted RBP20.67■□□□□ 0.9
RAB40C-204ENST00000538492 TLE1Q04724 770 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 TFF3Q07654 80 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 UTF1Q5T230 341 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 BSNQ9UPA5 3926 aa20.67■□□□□ 0.9
RAB40C-204ENST00000538492 M0R1X1 148 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 KLK10O43240 276 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 FAM27E3Q08E93 113 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 TCF15Q12870 199 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 VKORC1L1Q8N0U8 176 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 PPP1R35Q8TAP8 253 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 LHX4Q969G2 390 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 CFHR2P36980 270 aa20.66■□□□□ 0.9
RAB40C-204ENST00000538492 HEPN1Q6WQI6 88 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms