RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 DUTP33316 252 aaKnown RBP6.56□□□□□ -1.36
SPARC-208ENST00000538026 TALDO1P37837 337 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 CX3CL1P78423 397 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 TIMM50Q3ZCQ8 353 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 CNIH2Q6PI25 160 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 C8orf86Q6ZUL3 223 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 HOGA1Q86XE5 327 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 ANKRD13BQ86YJ7 626 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 MINDY2Q8NBR6 621 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.56□□□□□ -1.36
SPARC-208ENST00000538026 CHPT1Q8WUD6 406 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 DUX3Q96PT4 197 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 GPHA2Q96T91 129 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 OR2D2Q9H210 308 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 OR51J1Q9H342 316 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 GHITMQ9H3K2 345 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 ANXA10Q9UJ72 324 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 ZNF580Q9UK33 172 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 ANAPC10Q9UM13 185 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 WASHC3Q9Y3C0 194 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 NUBP2Q9Y5Y2 271 aa6.56□□□□□ -1.36
SPARC-208ENST00000538026 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
SPARC-208ENST00000538026 A0A0A6YYH2 397 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 MEIS3P1A6NDR6 274 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 A6NJ64 397 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 PRB2P02812 416 aaPredicted RBP6.55□□□□□ -1.36
SPARC-208ENST00000538026 IGLL1P15814 213 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 MC5RP33032 325 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 CRIP2P52943 208 aaPredicted RBP6.55□□□□□ -1.36
SPARC-208ENST00000538026 GNG2P59768 71 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 ARL6IP1Q15041 203 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 ZNF660Q6AZW8 331 aaPredicted RBP6.55□□□□□ -1.36
SPARC-208ENST00000538026 LIN54Q6MZP7 749 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 LYSMD2Q8IV50 215 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 FOXRED2Q8IWF2 684 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 MRPL41Q8IXM3 137 aaKnown RBP6.55□□□□□ -1.36
SPARC-208ENST00000538026 SAMD12Q8N8I0 201 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 LINC00482Q8N8I6 264 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 OR4X2Q8NGF9 303 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 CASTOR1Q8WTX7 329 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 RAX2Q96IS3 184 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 P2RX4Q99571 388 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 RNF5Q99942 180 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 ZNF221Q9UK13 617 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 OR2W1Q9Y3N9 320 aa6.55□□□□□ -1.36
SPARC-208ENST00000538026 H7C2Y5 167 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 SLC25A17O43808 307 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 HPGDSO60760 199 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 TMEM127O75204 238 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
SPARC-208ENST00000538026 SCGNO76038 276 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 NAT1P18440 290 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 ELK1P19419 428 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 AADACP22760 399 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 THBS3P49746 956 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 TAS2R20P59543 309 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 MRPS15P82914 257 aaKnown RBP6.54□□□□□ -1.36
SPARC-208ENST00000538026 PITPNAQ00169 270 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 FOXE3Q13461 319 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 SPCS2Q15005 226 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 DEFB136Q30KP8 78 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 TMEM177Q53S58 311 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 UBE2NLQ5JXB2 153 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 GPR107Q5VW38 600 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 TEX38Q6PEX7 206 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 CROCCP3Q8IVE0 287 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 BVESQ8NE79 360 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 BEST4Q8NFU0 473 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 OR4F17Q8NGA8 305 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 OR4F4Q96R69 305 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 CLCC1Q96S66 551 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 GINS4Q9BRT9 223 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 FAM103A1Q9BTL3 118 aaKnown RBP6.54□□□□□ -1.36
SPARC-208ENST00000538026 MRPS26Q9BYN8 205 aaKnown RBP6.54□□□□□ -1.36
SPARC-208ENST00000538026 MIXL1Q9H2W2 232 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 GNB4Q9HAV0 340 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 VCX3AQ9NNX9 186 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 PARP11Q9NR21 331 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 SLC35D1Q9NTN3 355 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 ZFP57Q9NU63 452 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 COMMD3Q9UBI1 195 aa6.54□□□□□ -1.36
SPARC-208ENST00000538026 PLECQ15149 4684 aaKnown RBP6.54□□□□□ -1.36
SPARC-208ENST00000538026 RBBP9O75884 186 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 CA2P00918 260 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 ELANEP08246 267 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 CTXN2P0C2S0 81 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 FCGR2CP31995 323 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 CDX1P47902 265 aaPredicted RBP6.53□□□□□ -1.36
SPARC-208ENST00000538026 KRTAP10-11P60412 298 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 RPS16P62249 146 aaKnown RBP6.53□□□□□ -1.36
SPARC-208ENST00000538026 PDLIM3Q53GG5 364 aaPredicted RBP6.53□□□□□ -1.36
SPARC-208ENST00000538026 KHDC1LQ5JSQ8 128 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 ZNF562Q6V9R5 426 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 PDPNQ86YL7 162 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 COMMD1Q8N668 190 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 ZNF645Q8N7E2 425 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 ZNF491Q8N8L2 437 aa6.53□□□□□ -1.36
SPARC-208ENST00000538026 GPX8Q8TED1 209 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms