RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
GPN3-202ENST00000537466 NDPQ00604 133 aa13.58□□□□□ -0.24
GPN3-202ENST00000537466 PSG5Q15238 335 aa13.58□□□□□ -0.24
GPN3-202ENST00000537466 LCNL1Q6ZST4 164 aa13.58□□□□□ -0.24
GPN3-202ENST00000537466 C18orf65Q6ZTR6 163 aa13.58□□□□□ -0.24
GPN3-202ENST00000537466 LINC00473A8K010 186 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 G3V318 75 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 HPGDSO60760 199 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 TUSC2O75896 110 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 IGLV2-14P01704 120 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 VDAC1P21796 283 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 DUTP33316 252 aaKnown RBP13.57□□□□□ -0.24
GPN3-202ENST00000537466 THBS3P49746 956 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 RPL23AP62750 156 aaKnown RBP13.57□□□□□ -0.24
GPN3-202ENST00000537466 PLGLAQ15195 96 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 TEX38Q6PEX7 206 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 COMMD1Q8N668 190 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 ZNF645Q8N7E2 425 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 BVESQ8NE79 360 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 DDB2Q92466 427 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 FLYWCH2Q96CP2 140 aaKnown RBP13.57□□□□□ -0.24
GPN3-202ENST00000537466 CLCC1Q96S66 551 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 GON7Q9BXV9 100 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 PARP11Q9NR21 331 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 TPSG1Q9NRR2 321 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 METTL1Q9UBP6 276 aaKnown RBP13.57□□□□□ -0.24
GPN3-202ENST00000537466 ZNF580Q9UK33 172 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 FBXO7Q9Y3I1 522 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 WSB1Q9Y6I7 421 aa13.57□□□□□ -0.24
GPN3-202ENST00000537466 NOTCH1P46531 2555 aa13.56□□□□□ -0.24
GPN3-202ENST00000537466 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
GPN3-202ENST00000537466 PF4V1P10720 104 aa13.56□□□□□ -0.24
GPN3-202ENST00000537466 ELK1P19419 428 aa13.56□□□□□ -0.24
GPN3-202ENST00000537466 CBX5P45973 191 aa13.56□□□□□ -0.24
GPN3-202ENST00000537466 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
GPN3-202ENST00000537466 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
GPN3-202ENST00000537466 TSNAXQ99598 290 aaKnown RBP13.56□□□□□ -0.24
GPN3-202ENST00000537466 SLC25A17O43808 307 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 IGHG4P01861 327 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 APOA1P02647 267 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 AADACP22760 399 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 FCGR2CP31995 323 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 CX3CL1P78423 397 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 CMTM3Q96MX0 182 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 IFT46Q9NQC8 304 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 NECAP2Q9NVZ3 263 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 ANAPC10Q9UM13 185 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 G3V4G9 280 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 SPDEFO95238 335 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 OR5H8P0DN80 308 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
GPN3-202ENST00000537466 FOXE3Q13461 319 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 SPCS2Q15005 226 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 ZNF660Q6AZW8 331 aaPredicted RBP13.55□□□□□ -0.24
GPN3-202ENST00000537466 CLVS1Q8IUQ0 354 aaPredicted RBP13.55□□□□□ -0.24
GPN3-202ENST00000537466 OR5AP2Q8NGF4 316 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 ADTRPQ96IZ2 230 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 HARBI1Q96MB7 349 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 ZFP57Q9NU63 452 aa13.55□□□□□ -0.24
GPN3-202ENST00000537466 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
GPN3-202ENST00000537466 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 CA2P00918 260 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 ELANEP08246 267 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 EGR2P11161 476 aaPredicted RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 PSMB8P28062 276 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 PRSS3P35030 304 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 RPL30P62888 115 aaKnown RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 DEFA6Q01524 100 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 TAGLNQ01995 201 aaKnown RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 EIF4EBP1Q13541 118 aaPredicted RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 RTL8BQ17RB0 113 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 TMEM177Q53S58 311 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 ETV3LQ6ZN32 361 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 C8orf86Q6ZUL3 223 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 RNF152Q8N8N0 203 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 KLHL30-AS1Q8NEE0 82 aa13.54□□□□□ -0.24
GPN3-202ENST00000537466 FAM103A1Q9BTL3 118 aaKnown RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 MRPS7Q9Y2R9 242 aaKnown RBP13.54□□□□□ -0.24
GPN3-202ENST00000537466 NUDT19A8MXV4 375 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 SHOXO15266 292 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 CRYZL1O95825 349 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 PPYP01298 95 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 PF4P02776 101 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 CRYGBP07316 175 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 RRASP10301 218 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 CRIP2P52943 208 aaPredicted RBP13.53□□□□□ -0.24
GPN3-202ENST00000537466 CDK10Q15131 360 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 ECSCRQ19T08 205 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 C19orf54Q5BKX5 351 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 MZT2AQ6P582 158 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 SECTM1Q8WVN6 248 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 AP3S1Q92572 193 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 A3GALT2U3KPV4 340 aa13.53□□□□□ -0.24
GPN3-202ENST00000537466 SMIM31A0A1B0GVY4 71 aa13.52□□□□□ -0.25
GPN3-202ENST00000537466 SLC22A5O76082 557 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms