RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PLPPR5Q32ZL2 321 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ABCA11PQ4W5N1 156 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SLC18B1Q6NT16 456 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 FDX2Q6P4F2 183 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 PARM1Q6UWI2 310 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SH2D6Q7Z4S9 175 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 AMZ2Q86W34 360 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 OR2M7Q8NG81 312 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 OTOSQ8NHW6 89 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 FGF14Q92915 247 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 EMG1Q92979 244 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 RSPRY1Q96DX4 576 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SIGLEC12Q96PQ1 595 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SMDT1Q9H4I9 107 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ZNF286AQ9HBT8 521 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CES1P1Q9UKY3 287 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 KNL1Q8NG31 2342 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 GAGE12HA6NDE8 117 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 TIAF1O95411 115 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CLEC3BP05452 202 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CTLA4P16410 223 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 GDF1P27539 372 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 GNRHRP30968 328 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 DAP3P51398 398 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 ZNF90Q03938 601 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 RPL18Q07020 188 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 HIST3H3Q16695 136 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 VAX1Q5SQQ9 334 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 CARD17Q5XLA6 110 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SLC48A1Q6P1K1 146 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 KCNIP4Q6PIL6 250 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 PRSS41Q7RTY9 318 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 RPP25LQ8N5L8 163 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 DEFB125Q8N687 156 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 ZNF439Q8NDP4 499 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 TMEM52Q8NDY8 209 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 SPSB1Q96BD6 273 aa3.16□□□□□ -1.9
MCF2-210ENST00000536274 KTI12Q96EK9 354 aaPredicted RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 FAM71F1Q96KD3 344 aaPredicted RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 MRPL27Q9P0M9 148 aaKnown RBP3.16□□□□□ -1.9
MCF2-210ENST00000536274 CFAP47Q6ZTR5 3102 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 UNC13CQ8NB66 2214 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 IGKV1D-42A0A075B6H8 117 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 A0A0G2JRQ6 117 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 TRBV7-9A0A0J9YWB2 115 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 DUXBA0A1W2PPF3 345 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 HSPB2A8KAH6 182 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 APOA2P02652 100 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 VDAC1P21796 283 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 HIST1H1TP22492 207 aaPredicted RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 PPIFP30405 207 aaKnown RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 SRIP30626 198 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 TNFRSF4P43489 277 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 SCAND1P57086 179 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 HSD52Q0P140 79 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 PSG7Q13046 419 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 FXYD3Q14802 87 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 HSPB2Q16082 182 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 CTXN3Q4LDR2 81 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 GCSAMLQ5JQS6 135 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 MRPL54Q6P161 138 aaKnown RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 DTX1Q86Y01 620 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 LYPD6Q86Y78 171 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 ZNF547Q8IVP9 402 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 OR51E1Q8TCB6 317 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 TSKUQ8WUA8 353 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 FAM131CQ96AQ9 280 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 MSI2Q96DH6 328 aaKnown RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 C1orf159Q96HA4 380 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 QTRT1Q9BXR0 403 aaKnown RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 TMEM59Q9BXS4 323 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 PNRC2Q9NPJ4 139 aaKnown RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 NECAP2Q9NVZ3 263 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 CLCF1Q9UBD9 225 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 COA3Q9Y2R0 106 aaPredicted RBP3.15□□□□□ -1.9
MCF2-210ENST00000536274 OR51B4Q9Y5P0 310 aa3.15□□□□□ -1.9
MCF2-210ENST00000536274 TRIOO75962 3097 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 IGKV1D-43A0A0B4J1Z2 117 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 C10orf142B7Z368 130 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 KLRC4-KLRK1H3BQV0 150 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 CHEK1O14757 476 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 HS3ST1O14792 307 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 HCRTR1O43613 425 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 PITX3O75364 302 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 KRASP01116 189 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 HBE1P02100 147 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 TYMSP04818 313 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 ADH4P08319 380 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 PAX9P55771 341 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 MTCP1P56278 107 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 GNB1P62873 340 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 TNXAQ16473 311 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 LTC4SQ16873 150 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 DEFB134Q4QY38 66 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 C1orf100Q5SVJ3 147 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 CBLN3Q6UW01 205 aa3.15□□□□□ -1.91
MCF2-210ENST00000536274 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms