RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 H2BFSP57053 126 aa18.65■□□□□ 0.58
RBFOX1-206ENST00000535565 CD300CQ08708 224 aa18.65■□□□□ 0.58
RBFOX1-206ENST00000535565 SELENOHQ8IZQ5 122 aaKnown RBP18.65■□□□□ 0.58
RBFOX1-206ENST00000535565 SLC35G3Q8N808 338 aa18.65■□□□□ 0.58
RBFOX1-206ENST00000535565 WNK2Q9Y3S1 2297 aa18.65■□□□□ 0.58
RBFOX1-206ENST00000535565 UNC79Q9P2D8 2635 aa18.65■□□□□ 0.58
RBFOX1-206ENST00000535565 C13orf42A0A1B0GVH6 325 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 BUB1B-PAK6H3BSN5 160 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 HOXB4P17483 251 aaPredicted RBP18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 PAX8Q06710 450 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 KLRD1Q13241 179 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 DCAF12L2Q5VW00 463 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 KRTAP1-3Q8IUG1 177 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 TCTE3Q8IZS6 198 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 LINC01356Q8N9X3 169 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 ST6GALNAC6Q969X2 333 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 FYTTD1Q96QD9 318 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 TMED3Q9Y3Q3 217 aa18.64■□□□□ 0.58
RBFOX1-206ENST00000535565 TRAV20A0A0B4J274 112 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 OR2A4O95047 310 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 RAP2BP61225 183 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 ZNF585BQ52M93 769 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 LYZL2Q7Z4W2 148 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 TGIF2LXQ8IUE1 241 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 OR4P4Q8NGL7 312 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 OR2A7Q96R45 310 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 FOXC2Q99958 501 aa18.64■□□□□ 0.57
RBFOX1-206ENST00000535565 MED13LQ71F56 2210 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 ASH1LQ9NR48 2969 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 RBFOX2O43251 390 aaKnown RBP eCLIP18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 RAMP3O60896 148 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 FCGR3BO75015 233 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 ATG12O94817 140 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 GATA3P23771 443 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 LPAR6P43657 344 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 LINC00205P59089 165 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 ZNF816Q0VGE8 651 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 GGNBP1Q5YKI7 109 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 HCP5Q6MZN7 132 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 DDB2Q92466 427 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 TBX15Q96SF7 602 aa18.63■□□□□ 0.57
RBFOX1-206ENST00000535565 ODF3BA8MYP8 253 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 HNRNPCP07910 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 CT45A6P0DMU7 189 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 CT45A5P0DMU8 189 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 CT45A7P0DMV0 189 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 HTR1DP28221 377 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 CEACAM3P40198 252 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 TAGLNQ01995 201 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 ZNF383Q8NA42 475 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 OR4S2Q8NH73 311 aa18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 RNASE11Q8TAA1 199 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 MRPL20Q9BYC9 149 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-206ENST00000535565 CR1P17927 2039 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 VPS13CQ709C8 3753 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 LEUTXA8MZ59 168 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 RNASEK-C17orf49H0YIS7 233 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 TXNL1O43396 289 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 VDAC1P21796 283 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 REG1BP48304 166 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 CYCSP99999 105 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 RTL8BQ17RB0 113 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 RPEQ96AT9 228 aa18.61■□□□□ 0.57
RBFOX1-206ENST00000535565 HPRT1P00492 218 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 APOA2P02652 100 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 GAPDHP04406 335 aaKnown RBP18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 UBE2E1P51965 193 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 AKR1C2P52895 323 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 BRWD1-AS2P59051 145 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 SRSF4Q08170 494 aaKnown RBP18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 PDZD9Q8IXQ8 264 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 LHX4Q969G2 390 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 SEC22AQ96IW7 307 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 HIF1ANQ9NWT6 349 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 DPM3Q9P2X0 92 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 HECTD1Q9ULT8 2610 aa18.6■□□□□ 0.57
RBFOX1-206ENST00000535565 S1PR2O95136 353 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 IGKV1-39P01597 117 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 IGKV1D-39P04432 117 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 RRASP10301 218 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 LGALS4P56470 323 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 DIAPH2-AS1Q14236 149 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 IAH1Q2TAA2 248 aaPredicted RBP18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 MAPK1IP1LQ8NDC0 245 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 OR2T35Q8NGX2 323 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 RRNAD1Q96FB5 475 aaKnown RBP18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 OR10C1Q96KK4 312 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 C2orf50Q96LR7 162 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 SPIN2AQ99865 258 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 SPIN2BQ9BPZ2 258 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 NMES1Q9C002 83 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 PLEKHA2Q9HB19 425 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 SLC35D1Q9NTN3 355 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 AUP1Q9Y679 476 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 MPTX1A8MV57 137 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 EPHA1P21709 976 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 DHRS7BQ6IAN0 325 aaPredicted RBP18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 LSM10Q969L4 123 aaKnown RBP18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 NABP2Q9BQ15 211 aa18.59■□□□□ 0.57
RBFOX1-206ENST00000535565 LY6LH3BQJ8 138 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms