RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 NUBP2Q9Y5Y2 271 aa10.26□□□□□ -0.77
CLSTN3-205ENST00000535452 V9GY05 133 aa10.26□□□□□ -0.77
CLSTN3-205ENST00000535452 CASQ2O14958 399 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 BET1O15155 118 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 SOCS1O15524 211 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 LYL1P12980 280 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 ARFRP1Q13795 201 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 INSL4Q14641 139 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 ZNF880Q6PDB4 577 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 OVCH2Q7RTZ1 564 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 MUC7Q8TAX7 377 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 CASTOR1Q8WTX7 329 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 FBLIM1Q8WUP2 373 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 FAM3DQ96BQ1 224 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 ARHGAP5-AS1Q96IT6 56 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 ADTRPQ96IZ2 230 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 FKBP14Q9NWM8 211 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 COA4Q9NYJ1 87 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 OR1A1Q9P1Q5 309 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
CLSTN3-205ENST00000535452 FABP7O15540 132 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 IFNA6P05013 189 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 SCTP09683 121 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 FRMD6-AS1P0C7T7 363 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 MLLT11Q13015 90 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 RPEL1Q2QD12 228 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 DCUN1D5Q9BTE7 237 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 PECRQ9BY49 303 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 OR2D2Q9H210 308 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 KCNK15Q9H427 330 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 TUBA4BQ9H853 241 aa10.24□□□□□ -0.77
CLSTN3-205ENST00000535452 A0A075B6Q4 140 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 FCN1O00602 326 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 LDLRAD4O15165 306 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 NDPQ00604 133 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 KIAA0141Q14154 515 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 FAM209BQ5JX69 171 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 LCN12Q6JVE5 192 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 FAM89BQ8N5H3 189 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 OR5T1Q8NG75 326 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 ISOC1Q96CN7 298 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 RBMXL1Q96E39 390 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 USMG5Q96IX5 58 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 AGMATQ9BSE5 352 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 HDHD3Q9BSH5 251 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 MRPS7Q9Y2R9 242 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 FBXO7Q9Y3I1 522 aa10.23□□□□□ -0.77
CLSTN3-205ENST00000535452 ANKRD34BA5PLL1 514 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 SOX15O60248 233 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 TUSC2O75896 110 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 DIRAS3O95661 229 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 HSPA13P48723 471 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 RPS25P62851 125 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 C2orf76Q3KRA6 126 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 HES5Q5TA89 166 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 ASPHD1Q5U4P2 390 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 C5orf24Q7Z6I8 188 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 SBSPONQ8IVN8 264 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 ACOT12Q8WYK0 555 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 SNAPC3Q92966 411 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 RHOVQ96L33 236 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 MGLLQ99685 303 aa10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 PEF1Q9UBV8 284 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-205ENST00000535452 DPPA5A6NC42 116 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 SCGNO76038 276 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 IGKV1-16P04430 117 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 CD36P16671 472 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 MAP2K4P45985 399 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 CLDN12P56749 244 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 QRFPP83859 136 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 PRSS48Q7RTY5 328 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 SLC25A42Q86VD7 318 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 ZNF383Q8NA42 475 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 OR9G4Q8NGQ1 327 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 SPATA25Q9BR10 227 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 GAB2Q9UQC2 676 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 PRELID3BQ9Y3B1 194 aa10.21□□□□□ -0.77
CLSTN3-205ENST00000535452 A0A0A6YYD4 124 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 AIREO43918 545 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 SLC22A5O76082 557 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 DHFRP00374 187 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 CTXN2P0C2S0 81 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 SSX1Q16384 188 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 TNXAQ16473 311 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 C19orf54Q5BKX5 351 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 LAIR2Q6ISS4 152 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 ZNF367Q7RTV3 350 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 BVESQ8NE79 360 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 OR10R2Q8NGX6 335 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 VSTM2AQ8TAG5 236 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 OSR1Q8TAX0 266 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 SPIN2AQ99865 258 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 SPIN2BQ9BPZ2 258 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 PARP12Q9H0J9 701 aaKnown RBP10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 SDHAF2Q9NX18 166 aa10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 LSM2Q9Y333 95 aaKnown RBP10.2□□□□□ -0.78
CLSTN3-205ENST00000535452 TRIM64CA6NLI5 447 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 FCGR3AP08637 254 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 GSTT2P0CG29 244 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms