RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 KLF5Q13887 457 aaPredicted RBP12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 SPHARQ15513 63 aa12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 RNLSQ5VYX0 342 aa12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 FAM89BQ8N5H3 189 aa12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 CMSS1Q9BQ75 279 aaKnown RBP12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 EDA2RQ9HAV5 297 aa12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 SLC35D1Q9NTN3 355 aa12.9□□□□□ -0.34
CAPRIN1-216ENST00000534042 PTGES3LE9PB15 166 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 SLC17A2O00624 439 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 VEGFCP49767 419 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 TMEM50BP56557 158 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 RCN1Q15293 331 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 MED22Q15528 200 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 OR9G4Q8NGQ1 327 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 TMEM68Q96MH6 324 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 SPATA25Q9BR10 227 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 PECRQ9BY49 303 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 RDH8Q9NYR8 311 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 DNAH7Q8WXX0 4024 aa12.89□□□□□ -0.35
CAPRIN1-216ENST00000534042 IGKV1-6A0A0C4DH72 117 aa12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 FOXI3A8MTJ6 420 aaPredicted RBP12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 LGALS7P47929 136 aa12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 PJVKQ0ZLH3 352 aa12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 TMEM203Q969S6 136 aa12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 LSM2Q9Y333 95 aaKnown RBP12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
CAPRIN1-216ENST00000534042 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 AADACP22760 399 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 SERPINB10P48595 397 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 SSBP2P81877 361 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 RAB11BQ15907 218 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 HAGHQ16775 308 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 TATDN3Q17R31 274 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 UFD1Q92890 307 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 GFI1Q99684 422 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 PEF1Q9UBV8 284 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 DYNC2H1Q8NCM8 4307 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-216ENST00000534042 BRI3O95415 125 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 CRYGBP07316 175 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 CBX3Q13185 183 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 OGFRL1Q5TC84 451 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 GTSCR1Q86UQ5 136 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 OR4A4PQ8NGN8 299 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 HARBI1Q96MB7 349 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 OR2D2Q9H210 308 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 SCN3BQ9NY72 215 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 RYR2Q92736 4967 aa12.86□□□□□ -0.35
CAPRIN1-216ENST00000534042 SHOXO15266 292 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 FABP7O15540 132 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 ARL6IP5O75915 188 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 IFNA6P05013 189 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 CD3GP09693 182 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 RANBP1P43487 201 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 CLDN12P56749 244 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 DEFA5Q01523 94 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 TAGLNQ01995 201 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 PLAC9Q5JTB6 97 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 TMEM91Q6ZNR0 172 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 BVESQ8NE79 360 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 FAM3DQ96BQ1 224 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 PHB2Q99623 299 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 SDHAF2Q9NX18 166 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 ADAM30Q9UKF2 790 aa12.85□□□□□ -0.35
CAPRIN1-216ENST00000534042 BET1O15155 118 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 DENRO43583 198 aaKnown RBP12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 CSN3P07498 182 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 C2orf76Q3KRA6 126 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 TMEM177Q53S58 311 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 ADAMTSL5Q6ZMM2 481 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 Q8N402 240 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 OR10J5Q8NHC4 309 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 VCXQ9H320 206 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 SIGLEC8Q9NYZ4 499 aa12.84□□□□□ -0.35
CAPRIN1-216ENST00000534042 A0A0B4J203 849 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 MSGN1A6NI15 193 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 APELAP0DMC3 54 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 RRASP10301 218 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 DYRK1AQ13627 763 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 TPBGQ13641 420 aa12.83□□□□□ -0.36
CAPRIN1-216ENST00000534042 IRF3Q14653 427 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms