RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TRBV12-3P01733 135 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 ZP3P21754 424 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 P2RY14Q15391 338 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 MRGPRG-AS1Q2M3A8 158 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 SGPP2Q8IWX5 399 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 PACRGLQ8N7B6 248 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 EDARADDQ8WWZ3 215 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 C13orf42A0A1B0GVH6 325 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 IZUMO1RA6ND01 250 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 CSN3P07498 182 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 SYNJ2BPP57105 145 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 C8orf59Q8N0T1 100 aaPredicted RBP13.73□□□□□ -0.21
UBXN1-216ENST00000533908 RDH8Q9NYR8 311 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 ZNF221Q9UK13 617 aa13.73□□□□□ -0.21
UBXN1-216ENST00000533908 LSM2Q9Y333 95 aaKnown RBP13.73□□□□□ -0.21
UBXN1-216ENST00000533908 LYSTQ99698 3801 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 H3BUA1 57 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 M0R1X1 148 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 CD3GP09693 182 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 UCHL1P09936 223 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 HSD17B12Q53GQ0 312 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 OR6M1Q8NGM8 313 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 C5orf30Q96GV9 206 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 ARHGAP5-AS1Q96IT6 56 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 SPATA25Q9BR10 227 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 SLC35D1Q9NTN3 355 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 HSF4Q9ULV5 492 aa13.72□□□□□ -0.21
UBXN1-216ENST00000533908 A0A0G2JLM5 398 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 SRRM4A7MD48 611 aaKnown RBP13.71□□□□□ -0.21
UBXN1-216ENST00000533908 CNIH1O95406 144 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 CDK1P06493 297 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 MECP2P51608 486 aaKnown RBP13.71□□□□□ -0.21
UBXN1-216ENST00000533908 PLA2G7Q13093 441 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 DYRK1AQ13627 763 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 PLAC9Q5JTB6 97 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 RNLSQ5VYX0 342 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 ZNF343Q6P1L6 599 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 TMEM91Q6ZNR0 172 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 TMEM203Q969S6 136 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 PECRQ9BY49 303 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 TINAGL1Q9GZM7 467 aaPredicted RBP13.71□□□□□ -0.21
UBXN1-216ENST00000533908 C12orf4Q9NQ89 552 aa13.71□□□□□ -0.21
UBXN1-216ENST00000533908 PEF1Q9UBV8 284 aaKnown RBP13.71□□□□□ -0.21
UBXN1-216ENST00000533908 BRI3O95415 125 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 APOA2P02652 100 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 APELAP0DMC3 54 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 SPHARQ15513 63 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 CMSS1Q9BQ75 279 aaKnown RBP13.7□□□□□ -0.22
UBXN1-216ENST00000533908 URM1Q9BTM9 101 aaKnown RBP13.7□□□□□ -0.22
UBXN1-216ENST00000533908 MND1Q9BWT6 205 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 RETNQ9HD89 108 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 C8orf4Q9NR00 106 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 SDHAF2Q9NX18 166 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 MGAT4AQ9UM21 535 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 KCNK7Q9Y2U2 307 aa13.7□□□□□ -0.22
UBXN1-216ENST00000533908 AK6Q9Y3D8 172 aaKnown RBP13.7□□□□□ -0.22
UBXN1-216ENST00000533908 TRDCB7Z8K6 153 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 PTGES3LE9PB15 166 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 H0Y980 276 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 SLC17A2O00624 439 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 LGALS7P47929 136 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 CLDN12P56749 244 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 MOGAT2Q3SYC2 334 aa13.69□□□□□ -0.22
UBXN1-216ENST00000533908 LINC00322Q6ZN03 302 aaPredicted RBP13.69□□□□□ -0.22
UBXN1-216ENST00000533908 HYDINQ4G0P3 5121 aa13.68□□□□□ -0.22
UBXN1-216ENST00000533908 IGSF11Q5DX21 431 aa13.68□□□□□ -0.22
UBXN1-216ENST00000533908 LIPKQ5VXJ0 399 aa13.68□□□□□ -0.22
UBXN1-216ENST00000533908 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.68□□□□□ -0.22
UBXN1-216ENST00000533908 BVESQ8NE79 360 aa13.68□□□□□ -0.22
UBXN1-216ENST00000533908 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
UBXN1-216ENST00000533908 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
UBXN1-216ENST00000533908 MSGN1A6NI15 193 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 GSTT2P0CG29 244 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 GSTT2BP0CG30 244 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 RPS25P62851 125 aaKnown RBP13.67□□□□□ -0.22
UBXN1-216ENST00000533908 IRF3Q14653 427 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 RCN1Q15293 331 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 TMEM177Q53S58 311 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 OGFRL1Q5TC84 451 aaPredicted RBP13.67□□□□□ -0.22
UBXN1-216ENST00000533908 ADAD2Q8NCV1 583 aaKnown RBP13.67□□□□□ -0.22
UBXN1-216ENST00000533908 TMEM68Q96MH6 324 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 HIPK2Q9H2X6 1198 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 TUBA4BQ9H853 241 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 COA4Q9NYJ1 87 aa13.67□□□□□ -0.22
UBXN1-216ENST00000533908 FABP7O15540 132 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 AADACP22760 399 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 MED22Q15528 200 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 RAB11BQ15907 218 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 OR4A4PQ8NGN8 299 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 FAM3DQ96BQ1 224 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 USMG5Q96IX5 58 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 HARBI1Q96MB7 349 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
UBXN1-216ENST00000533908 TRBV6-7A0A0A0MS04 114 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 ZNF785A8K8V0 405 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 BMPR1BO00238 502 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms