RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ZFP41Q8N8Y5 198 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 APH1BQ8WW43 257 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 TMEM80Q96HE8 168 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 PGLYRP3Q96LB9 341 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 HARBI1Q96MB7 349 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 DERL3Q96Q80 235 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 ST6GALNAC5Q9BVH7 336 aa8.76□□□□□ -1.01
CMTM1-216ENST00000533078 C11orf54Q9H0W9 315 aaPredicted RBP8.76□□□□□ -1.01
CMTM1-216ENST00000533078 NUPR2A6NF83 97 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 FAM223BA6NKX1 122 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 M0R1X1 148 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 SHOXO15266 292 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 ACTL6BO94805 426 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 NAPSAO96009 420 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 RPS27AP62979 156 aaKnown RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 TAGLNQ01995 201 aaKnown RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 SMN1Q16637 294 aaKnown RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 RTL8BQ17RB0 113 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 ZNF880Q6PDB4 577 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 LINC00322Q6ZN03 302 aaPredicted RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 FAM223AQ8IWN6 122 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 ZNF383Q8NA42 475 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 AGMATQ9BSE5 352 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 URM1Q9BTM9 101 aaKnown RBP8.75□□□□□ -1.01
CMTM1-216ENST00000533078 OR1A1Q9P1Q5 309 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 HERC2O95714 4834 aa8.75□□□□□ -1.01
CMTM1-216ENST00000533078 MYL12BO14950 172 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 CREBL2O60519 120 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-216ENST00000533078 NDUFB8O95169 186 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 LALBAP00709 142 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 TRBV12-3P01733 135 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 CD7P09564 240 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 CELP19835 753 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 MRPS15P82914 257 aaKnown RBP8.74□□□□□ -1.01
CMTM1-216ENST00000533078 DEFA5Q01523 94 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 DYRK1AQ13627 763 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 PMS2P11Q13670 270 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 EXOSC2Q13868 293 aaKnown RBP8.74□□□□□ -1.01
CMTM1-216ENST00000533078 VMA21Q3ZAQ7 101 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 OR10K2Q6IF99 312 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 PTX4Q96A99 478 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 PARP12Q9H0J9 701 aaKnown RBP8.74□□□□□ -1.01
CMTM1-216ENST00000533078 C12orf4Q9NQ89 552 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 TECRQ9NZ01 308 aaKnown RBP8.74□□□□□ -1.01
CMTM1-216ENST00000533078 CLEC2DQ9UHP7 191 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 ADAM30Q9UKF2 790 aa8.74□□□□□ -1.01
CMTM1-216ENST00000533078 HECTD4Q9Y4D8 3996 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 TRBV6-6A0A0A6YYG2 114 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 ERICH4A6NGS2 130 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 WBP4O75554 376 aaKnown RBP8.73□□□□□ -1.01
CMTM1-216ENST00000533078 BPNT1O95861 308 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 OR9G9P0C7N8 305 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 APELAP0DMC3 54 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 RRASP10301 218 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 HTR2CP28335 458 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 SERPINB10P48595 397 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 RHOGP84095 191 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 TPBGQ13641 420 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 ANKRD55Q3KP44 614 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 RBM48Q5RL73 367 aaKnown RBP8.73□□□□□ -1.01
CMTM1-216ENST00000533078 GGHQ92820 318 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 GGTLC1Q9BX51 225 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 TM2D1Q9BX74 207 aa8.73□□□□□ -1.01
CMTM1-216ENST00000533078 KLK5Q9Y337 293 aaPredicted RBP8.73□□□□□ -1.01
CMTM1-216ENST00000533078 RBM7Q9Y580 266 aaKnown RBP8.73□□□□□ -1.01
CMTM1-216ENST00000533078 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 EFCAB10A6NFE3 127 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 CD1AP06126 327 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 RANBP1P43487 201 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 MECP2P51608 486 aaKnown RBP8.72□□□□□ -1.01
CMTM1-216ENST00000533078 PJVKQ0ZLH3 352 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 TNXAQ16473 311 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 DEFB114Q30KQ6 69 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 SLC25A42Q86VD7 318 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 SETD9Q8NE22 299 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 OR52B4Q8NGK2 314 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 ACOT12Q8WYK0 555 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 SPIN2AQ99865 258 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 SPIN2BQ9BPZ2 258 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 SMPD3Q9NY59 655 aaPredicted RBP8.72□□□□□ -1.01
CMTM1-216ENST00000533078 RDH8Q9NYR8 311 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 AK3Q9UIJ7 227 aa8.72□□□□□ -1.01
CMTM1-216ENST00000533078 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-216ENST00000533078 ZNF785A8K8V0 405 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 BMPR1BO00238 502 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 GGCTO75223 188 aaKnown RBP8.71□□□□□ -1.02
CMTM1-216ENST00000533078 SCTP09683 121 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 FOLR2P14207 255 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 SRMP19623 302 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 WNT4P56705 351 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 ST3GAL4Q11206 333 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 MS4A15Q8N5U1 240 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 TMEM217Q8N7C4 229 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 TEX45Q8NA69 505 aa8.71□□□□□ -1.02
CMTM1-216ENST00000533078 NECAP1Q8NC96 275 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms