RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SSX5O60225 188 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 HLA-DRB1P01911 266 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 PF4V1P10720 104 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 CD40LGP29965 261 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 LINC00205P59089 165 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 DEFA6Q01524 100 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 C6orf62Q9GZU0 229 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-210ENST00000532935 GAB2Q9UQC2 676 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 RBBP9O75884 186 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 IGF1P05019 195 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 LIN54Q6MZP7 749 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 RNF5Q99942 180 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 DIABLOQ9NR28 239 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 SDHAF2Q9NX18 166 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 ZNF580Q9UK33 172 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 ADAM30Q9UKF2 790 aa12.08□□□□□ -0.48
CPSF1-210ENST00000532935 RBM7Q9Y580 266 aaKnown RBP12.08□□□□□ -0.48
CPSF1-210ENST00000532935 IGHV7-81A0A0B4J1V7 117 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 RRHO14718 337 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 APOA2P02652 100 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 IGKV1-16P04430 117 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 VDAC1P21796 283 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 PPP5CP53041 499 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 RPL23AP62750 156 aaKnown RBP12.07□□□□□ -0.48
CPSF1-210ENST00000532935 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
CPSF1-210ENST00000532935 CFHR3Q02985 330 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 CNIH2Q6PI25 160 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 PDPNQ86YL7 162 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 C1QL4Q86Z23 238 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 CMTM3Q96MX0 182 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 OR51J1Q9H342 316 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 FBXL15Q9H469 300 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 ZFP57Q9NU63 452 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
CPSF1-210ENST00000532935 G3V4G9 280 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 PF4P02776 101 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 PTBP1P26599 531 aaKnown RBP eCLIP12.06□□□□□ -0.48
CPSF1-210ENST00000532935 PLGLAQ15195 96 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 UBE2NLQ5JXB2 153 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 SPANXN2Q5MJ10 180 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 CCDC190Q86UF4 302 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 MFSD4AQ8N468 514 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 AUNIPQ9H7T9 357 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 SLC35D1Q9NTN3 355 aa12.06□□□□□ -0.48
CPSF1-210ENST00000532935 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 WIPF1O43516 503 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 XRCC3O43542 346 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 IGHG4P01861 327 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 NFYAP23511 347 aaPredicted RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 FOXE3Q13461 319 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 GVQW1Q8N7I0 195 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 SAMD12Q8N8I0 201 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 FLYWCH2Q96CP2 140 aaKnown RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 S100A16Q96FQ6 103 aaKnown RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 TSNAXQ99598 290 aaKnown RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 RABL2AQ9UBK7 228 aaPredicted RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 METTL1Q9UBP6 276 aaKnown RBP12.05□□□□□ -0.48
CPSF1-210ENST00000532935 RABL2BQ9UNT1 228 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 OR2W1Q9Y3N9 320 aa12.05□□□□□ -0.48
CPSF1-210ENST00000532935 NUDT19A8MXV4 375 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 J3QRK9 145 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 CTDSP2O14595 271 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 SPDEFO95238 335 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 RPLP1P05386 114 aaKnown RBP12.04□□□□□ -0.48
CPSF1-210ENST00000532935 ELANEP08246 267 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 PTHLHP12272 177 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 CD33P20138 364 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 SLC6A1P30531 599 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 TNFSF8P32971 234 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 THBS3P49746 956 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 LUMP51884 338 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-210ENST00000532935 NDPQ00604 133 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 PSG5Q15238 335 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-210ENST00000532935 ZNF660Q6AZW8 331 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-210ENST00000532935 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 HOGA1Q86XE5 327 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 KLHL30-AS1Q8NEE0 82 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 WFDC9Q8NEX5 89 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 BEST4Q8NFU0 473 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 WSB1Q9Y6I7 421 aa12.04□□□□□ -0.48
CPSF1-210ENST00000532935 G3V318 75 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 FCN1O00602 326 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 RGS5O15539 181 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 HLA-DQB1P01920 261 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 PSMB8P28062 276 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 PPIFP30405 207 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms